Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 SNORD126-201ENST00000459475 77 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 SNORD67.1-201ENST00000516618 108 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 AC084368.1-201ENST00000620935 65 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 uc_338.36-201ENST00000622331 158 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
LSM1O15116 RNU6-811P-201ENST00000384069 107 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 RNY1P6-201ENST00000384193 109 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 RNU4-70P-201ENST00000384579 139 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 AC244250.2-201ENST00000418731 148 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 RNU7-10P-201ENST00000607194 63 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 MIR548AZ-201ENST00000616567 95 ntBASIC-0.73□□□□□ -2.53
LSM1O15116 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 RNU6-509P-201ENST00000363519 107 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 SNORA79-201ENST00000408376 140 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 RNU7-113P-201ENST00000459273 62 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 RNY3P15-201ENST00000516297 97 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 NAMPTP3-201ENST00000569273 224 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 MIR6507-201ENST00000613630 70 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 FTX_2.1-201ENST00000618816 94 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 AL162726.3-218ENST00000636401 95 ntBASIC-0.74□□□□□ -2.53
LSM1O15116 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 MIR196A2-201ENST00000385189 110 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 RNU6-651P-201ENST00000411040 105 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 AC097635.1-201ENST00000450678 155 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.75□□□□□ -2.53
LSM1O15116 TRAJ51-201ENST00000504127 63 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 SNORD116-25-201ENST00000516517 92 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 RNA5SP33-201ENST00000516687 98 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 AC105081.1-201ENST00000617727 106 ntBASIC-0.75□□□□□ -2.53
LSM1O15116 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 SNORA32-201ENST00000384072 121 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 MIR599-201ENST00000385069 95 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 MIR4282-201ENST00000583613 67 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 AP001180.6-201ENST00000584918 159 ntBASIC-0.76□□□□□ -2.53
LSM1O15116 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.76□□□□□ -2.53
LSM1O15116 MIR369-201ENST00000362155 70 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 MIR519A1-201ENST00000385257 85 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 MTND4LP11-201ENST00000422184 280 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.77□□□□□ -2.53
LSM1O15116 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 MIR3920-201ENST00000581751 86 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 MIR4788-201ENST00000639104 80 ntBASIC-0.77□□□□□ -2.53
LSM1O15116 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 RNA5SP205-201ENST00000364653 136 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MIR635-201ENST00000384830 98 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MIR516B1-201ENST00000385211 90 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 AL022718.1-201ENST00000412004 84 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MTND5P22-201ENST00000458380 195 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MIR1270-201ENST00000459320 83 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MTND3P22-201ENST00000510932 243 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MIR548AE2-201ENST00000583456 67 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 MIR4263-201ENST00000584745 83 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 AC006504.6-201ENST00000590142 199 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 AL590491.3-201ENST00000610731 82 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 RN7SL660P-201ENST00000614852 299 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 AL365265.1-201ENST00000621045 234 ntBASIC-0.78□□□□□ -2.53
LSM1O15116 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.79□□□□□ -2.54
LSM1O15116 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.79□□□□□ -2.54
LSM1O15116 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.79□□□□□ -2.54
LSM1O15116 MIR4795-201ENST00000584182 89 ntBASIC-0.79□□□□□ -2.54
LSM1O15116 RNU6-103P-201ENST00000363686 107 ntBASIC-0.8□□□□□ -2.54
LSM1O15116 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.8□□□□□ -2.54
LSM1O15116 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.8□□□□□ -2.54
LSM1O15116 MIR1912-201ENST00000410389 80 ntBASIC-0.8□□□□□ -2.54
LSM1O15116 AC113195.1-201ENST00000579952 141 ntBASIC-0.8□□□□□ -2.54
LSM1O15116 RNU4-17P-201ENST00000365598 141 ntBASIC-0.81□□□□□ -2.54
LSM1O15116 AL442663.2-201ENST00000554385 511 ntBASIC-0.81□□□□□ -2.54
LSM1O15116 MIR5589-201ENST00000579442 60 ntBASIC-0.81□□□□□ -2.54
LSM1O15116 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.82□□□□□ -2.54
LSM1O15116 RNA5SP98-201ENST00000363158 137 ntBASIC-0.82□□□□□ -2.54
LSM1O15116 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.82□□□□□ -2.54
LSM1O15116 RPS29P8-201ENST00000445109 171 ntBASIC-0.82□□□□□ -2.54
LSM1O15116 MIR101-1-201ENST00000362265 75 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 RNU1-141P-201ENST00000364623 158 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 U8.6-201ENST00000364939 135 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 MIR548I2-201ENST00000408348 149 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 RNA5SP451-201ENST00000410588 110 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 RNA5SP236-201ENST00000516169 116 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 U2.14-201ENST00000615943 113 ntBASIC-0.83□□□□□ -2.54
LSM1O15116 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.83□□□□□ -2.54
LSM1O15116 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.84□□□□□ -2.54
LSM1O15116 AL603914.1-201ENST00000401964 204 ntBASIC-0.84□□□□□ -2.54
LSM1O15116 RNU6-284P-201ENST00000411105 106 ntBASIC-0.84□□□□□ -2.54
LSM1O15116 MTND5P40-201ENST00000559945 246 ntBASIC-0.84□□□□□ -2.54
LSM1O15116 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.85□□□□□ -2.55
LSM1O15116 RNU7-74P-201ENST00000459104 62 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms