Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 SNORA5B-201ENST00000363786 132 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 RNU6-54P-201ENST00000365563 107 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 RNU6ATAC29P-201ENST00000408088 125 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 RNA5SP344-201ENST00000411081 104 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 RNU7-174P-201ENST00000516248 59 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 MIR3126-201ENST00000577443 74 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 U4.4-201ENST00000620626 117 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PITPNM1O00562 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PITPNM1O00562 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PITPNM1O00562 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PITPNM1O00562 AP006437.1-201ENST00000641440 3685 ntBASIC3.54□□□□□ -1.84
PITPNM1O00562 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
PITPNM1O00562 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PITPNM1O00562 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PITPNM1O00562 SNORD41-201ENST00000386967 70 ntBASIC3.53□□□□□ -1.84
PITPNM1O00562 AC105272.1-201ENST00000438604 198 ntBASIC3.53□□□□□ -1.84
PITPNM1O00562 AC021146.9-201ENST00000512503 156 ntBASIC3.53□□□□□ -1.84
PITPNM1O00562 RNU7-13P-201ENST00000516413 62 ntBASIC3.53□□□□□ -1.84
PITPNM1O00562 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.53□□□□□ -1.84
PITPNM1O00562 MIR622-201ENST00000638396 96 ntBASIC3.53□□□□□ -1.84
PITPNM1O00562 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PITPNM1O00562 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.53□□□□□ -1.84
PITPNM1O00562 RNU6-1162P-201ENST00000384443 104 ntBASIC3.52□□□□□ -1.85
PITPNM1O00562 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PITPNM1O00562 RNA5SP229-201ENST00000410809 99 ntBASIC3.52□□□□□ -1.85
PITPNM1O00562 SNORA31.26-201ENST00000517250 137 ntBASIC3.52□□□□□ -1.85
PITPNM1O00562 uc_338.1-201ENST00000612113 180 ntBASIC3.52□□□□□ -1.85
PITPNM1O00562 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PITPNM1O00562 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PITPNM1O00562 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PITPNM1O00562 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PITPNM1O00562 Y_RNA.250-201ENST00000364542 110 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 RNU6-1126P-201ENST00000384002 107 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 AC244505.6-201ENST00000452829 130 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 AC003982.1-202ENST00000469928 248 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 MIR3186-201ENST00000577404 85 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
PITPNM1O00562 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
PITPNM1O00562 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
PITPNM1O00562 SNORD21-201ENST00000383953 95 ntBASIC3.5□□□□□ -1.85
PITPNM1O00562 SNORA40.16-201ENST00000517238 121 ntBASIC3.5□□□□□ -1.85
PITPNM1O00562 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PITPNM1O00562 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PITPNM1O00562 RNA5SP245-201ENST00000364239 121 ntBASIC3.49□□□□□ -1.85
PITPNM1O00562 RNU6-360P-201ENST00000390944 104 ntBASIC3.49□□□□□ -1.85
PITPNM1O00562 SNORD42B-201ENST00000458893 67 ntBASIC3.49□□□□□ -1.85
PITPNM1O00562 MIR548AG2-201ENST00000581228 64 ntBASIC3.49□□□□□ -1.85
PITPNM1O00562 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
PITPNM1O00562 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
PITPNM1O00562 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PITPNM1O00562 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PITPNM1O00562 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PITPNM1O00562 RNU6-203P-201ENST00000384038 104 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 SNORA54-201ENST00000384281 123 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RNU6-696P-201ENST00000390834 107 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 SNORD116.2-201ENST00000391251 93 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RNA5SP501-201ENST00000410990 112 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RN7SL429P-201ENST00000479090 223 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RN7SL489P-201ENST00000486185 223 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RN7SL327P-201ENST00000488659 223 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RN7SL853P-201ENST00000617250 223 ntBASIC3.48□□□□□ -1.85
PITPNM1O00562 RNU6-247P-201ENST00000362636 107 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 SNORA71.1-201ENST00000364523 117 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 RNU6-535P-201ENST00000384722 107 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 MIR521-2-201ENST00000384818 87 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 AC004965.1-201ENST00000413033 213 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 AL513328.1-201ENST00000446460 224 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 AC018659.1-201ENST00000551083 169 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.47□□□□□ -1.85
PITPNM1O00562 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PITPNM1O00562 RNU6-990P-201ENST00000364385 104 ntBASIC3.46□□□□□ -1.86
PITPNM1O00562 SNORA41B-201ENST00000384785 128 ntBASIC3.46□□□□□ -1.86
PITPNM1O00562 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PITPNM1O00562 RNA5SP95-201ENST00000410319 137 ntBASIC3.46□□□□□ -1.86
PITPNM1O00562 MIR3162-201ENST00000581818 82 ntBASIC3.46□□□□□ -1.86
PITPNM1O00562 U2.7-201ENST00000619197 100 ntBASIC3.46□□□□□ -1.86
PITPNM1O00562 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PITPNM1O00562 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PITPNM1O00562 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PITPNM1O00562 SNORD15B-201ENST00000384714 146 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 MIR194-1-201ENST00000384892 85 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 MIR184-201ENST00000384962 84 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.45□□□□□ -1.86
PITPNM1O00562 RNU6-922P-201ENST00000516753 99 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 AP003716.2-201ENST00000528260 108 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 MIR4738-201ENST00000579134 87 ntBASIC3.45□□□□□ -1.86
PITPNM1O00562 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PITPNM1O00562 MIR617-201ENST00000385030 97 ntBASIC3.44□□□□□ -1.86
PITPNM1O00562 RNA5SP356-201ENST00000515972 94 ntBASIC3.44□□□□□ -1.86
PITPNM1O00562 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
PITPNM1O00562 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PITPNM1O00562 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PITPNM1O00562 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 RNU6-301P-201ENST00000384277 107 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 MIR518A2-201ENST00000384966 87 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 MIR1185-1-201ENST00000408598 86 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 EEF1A1P41-201ENST00000414667 207 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 AC067940.1-201ENST00000458411 300 ntBASIC3.43□□□□□ -1.86
PITPNM1O00562 AC008608.1-201ENST00000603910 127 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms