Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR1197-201ENST00000408818 88 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 AC006210.1-201ENST00000424882 111 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 AC084368.1-201ENST00000620935 65 ntBASIC-0.49□□□□□ -2.49
SMKR1H3BMG3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR876-201ENST00000401147 81 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR548P-201ENST00000408336 84 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 RN7SL793P-201ENST00000583259 296 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 MIR3666-201ENST00000607845 111 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 AC105081.1-201ENST00000617727 106 ntBASIC-0.5□□□□□ -2.49
SMKR1H3BMG3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 MIR599-201ENST00000385069 95 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 RNU6-578P-201ENST00000390980 103 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.51□□□□□ -2.49
SMKR1H3BMG3 MIR193B-201ENST00000384907 83 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 AC109327.2-201ENST00000448339 378 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 AC097635.1-201ENST00000450678 155 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 snoU13.18-201ENST00000459483 104 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.52□□□□□ -2.49
SMKR1H3BMG3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 SNORD49B-201ENST00000365172 72 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 BX276092.1-201ENST00000427368 251 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 TRAJ51-201ENST00000504127 63 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.53□□□□□ -2.49
SMKR1H3BMG3 RNU6-643P-201ENST00000384018 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-713P-201ENST00000384761 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNU6-985P-201ENST00000410182 104 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 MIR4500-201ENST00000579472 76 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 MIR8087-201ENST00000612745 78 ntBASIC-0.54□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 MIR3171-201ENST00000584270 74 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.55□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-690P-201ENST00000365242 106 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 RNU2-35P-201ENST00000516446 142 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 MIR2909-201ENST00000617113 69 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR516B1-201ENST00000385211 90 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR548I2-201ENST00000408348 149 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 RNA5SP236-201ENST00000516169 116 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 MIR4263-201ENST00000584745 83 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 AC011603.4-201ENST00000611325 277 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 U6.104-201ENST00000637979 90 ntBASIC-0.57□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNY1-201ENST00000364228 113 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR519A1-201ENST00000385257 85 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR1287-201ENST00000408492 90 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 AC020661.2-201ENST00000560114 134 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR4643-201ENST00000577473 78 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR1273G-201ENST00000577677 100 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 MIR3920-201ENST00000581751 86 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 RNU2-4P-201ENST00000606190 192 ntBASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.58□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 MIR1302-6-201ENST00000408466 90 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 MIR1270-201ENST00000459320 83 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SMKR1H3BMG3 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNU4-69P-201ENST00000410677 143 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 RNY3P16-201ENST00000516338 101 ntBASIC-0.6□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 MIR206-201ENST00000384872 86 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
SMKR1H3BMG3 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 1084.2 ms