Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.4□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR330-201ENST00000362196 94 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.120-201ENST00000363304 110 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.240-201ENST00000364469 95 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNA5SP517-201ENST00000364724 117 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-818P-201ENST00000364837 108 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNA5SP117-201ENST00000365294 118 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.401-201ENST00000383965 117 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 SNORA75.5-201ENST00000391291 81 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 RNA5SP330-201ENST00000517096 96 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR6844-201ENST00000637122 62 ntBASIC0.39□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.85-201ENST00000363014 111 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-200P-201ENST00000364743 107 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.793-201ENST00000411222 111 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 AL512326.2-201ENST00000426359 151 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 RPL39P25-201ENST00000449384 154 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-388P-201ENST00000517012 105 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-389P-201ENST00000517048 105 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 AP003327.1-201ENST00000529684 127 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 uc_338.16-201ENST00000621804 95 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR3658-201ENST00000636291 56 ntBASIC0.38□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.357-201ENST00000365487 109 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 AL022718.1-201ENST00000412004 84 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU7-113P-201ENST00000459273 62 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-138P-201ENST00000515952 107 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU2-35P-201ENST00000516446 142 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-765P-201ENST00000516916 99 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 AP002392.1-201ENST00000537692 208 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 AC011603.4-201ENST00000611325 277 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
NEDD8-MDP1E9PL57 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-508P-201ENST00000363231 103 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-682P-201ENST00000363843 106 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-1318P-201ENST00000365389 103 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR644A-201ENST00000385262 94 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU7-120P-201ENST00000459334 63 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 RNA5SP33-201ENST00000516687 98 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 SNORA25.16-201ENST00000516741 121 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 MIR4305-201ENST00000583252 102 ntBASIC0.36□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.251-201ENST00000364551 99 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-690P-201ENST00000365242 106 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.441-201ENST00000384123 112 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.531-201ENST00000384589 121 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.552-201ENST00000384665 112 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 Y_RNA.651-201ENST00000459380 103 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-240P-201ENST00000516098 97 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 RNU6-861P-201ENST00000516745 106 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 DNAJC19P2-201ENST00000593340 302 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 AL109933.3-201ENST00000619095 188 ntBASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
NEDD8-MDP1E9PL57 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA36.1-201ENST00000363424 132 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.258-201ENST00000364613 105 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA31.14-201ENST00000516728 116 ntBASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.32-201ENST00000362589 110 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.366-201ENST00000365540 102 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA8.2-201ENST00000384372 139 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 RNU6-291P-201ENST00000384720 107 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 MTATP6P21-201ENST00000440681 189 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 MIR1270-201ENST00000459320 83 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA25.12-201ENST00000516202 82 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 MTND5P34-201ENST00000568888 325 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 MIR548AE2-201ENST00000583456 67 ntBASIC0.33□□□□□ -2.36
NEDD8-MDP1E9PL57 RNU6-309P-201ENST00000364573 106 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA32-201ENST00000384072 121 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA72.6-201ENST00000384520 129 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.536-201ENST00000384621 113 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 snosnR66.1-201ENST00000391095 99 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 RNU6-1135P-201ENST00000411083 103 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.700-201ENST00000516806 100 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 AL359881.1-201ENST00000602916 267 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.32□□□□□ -2.36
NEDD8-MDP1E9PL57 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.174-201ENST00000363781 105 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.374-201ENST00000365606 101 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.785-201ENST00000384290 109 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.567-201ENST00000384736 106 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 MIR1197-201ENST00000408818 88 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORD67.1-201ENST00000516618 108 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 RNU7-137P-201ENST00000516788 62 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 AC138907.4-201ENST00000570107 226 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.29-201ENST00000362570 113 ntBASIC0.3□□□□□ -2.36
NEDD8-MDP1E9PL57 Y_RNA.257-201ENST00000364596 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 429.4 ms