Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 RNA5SP95-201ENST00000410319 137 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 MIR3163-201ENST00000581592 73 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 AC012676.2-201ENST00000619258 186 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 MIR30D-201ENST00000362283 70 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 RNU6-834P-201ENST00000362367 110 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 RNU6-1081P-201ENST00000384537 107 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 SNORA22C-201ENST00000384614 134 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 MT-TF-201ENST00000387314 71 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 MT-TI-201ENST00000387365 69 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 AC002429.1-201ENST00000437672 148 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 MIR18B-201ENST00000454574 71 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
CCDC85CA6NKD9 MIR1270-201ENST00000459320 83 ntBASIC1.55□□□□□ -2.16
CCDC85CA6NKD9 SNORD115-19-201ENST00000363098 82 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 SNORD115-18-201ENST00000363293 82 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 SNORD115-17-201ENST00000364612 82 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 SNORA2B-201ENST00000384583 137 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 MIR759-201ENST00000390224 91 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 AC141846.1-201ENST00000568348 142 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 AC008163.1-202ENST00000636004 2889 ntBASIC1.54□□□□□ -2.16
CCDC85CA6NKD9 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
CCDC85CA6NKD9 RNA5SP237-201ENST00000410414 113 ntBASIC1.53□□□□□ -2.16
CCDC85CA6NKD9 SNORD33.1-201ENST00000516213 88 ntBASIC1.53□□□□□ -2.16
CCDC85CA6NKD9 RNY4P6-201ENST00000363667 96 ntBASIC1.52□□□□□ -2.17
CCDC85CA6NKD9 Y_RNA.258-201ENST00000364613 105 ntBASIC1.52□□□□□ -2.17
CCDC85CA6NKD9 uc_338.6-201ENST00000613544 171 ntBASIC1.52□□□□□ -2.17
CCDC85CA6NKD9 RNU6-949P-201ENST00000384040 107 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 MIR4679-2-201ENST00000578358 77 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 AL670379.3-201ENST00000605040 251 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 AC087741.2-201ENST00000619415 172 ntBASIC1.51□□□□□ -2.17
CCDC85CA6NKD9 Y_RNA.291-201ENST00000364886 113 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 RNY1P13-201ENST00000365030 105 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 SNORD77B-201ENST00000391112 67 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 RNU6-735P-201ENST00000410612 107 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 RNU7-79P-201ENST00000516082 62 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 AL359881.1-201ENST00000602916 267 ntBASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC85CA6NKD9 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 MIR548D2-201ENST00000384955 97 ntBASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 MIR618-201ENST00000385287 98 ntBASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 RNA5SP404-201ENST00000517118 132 ntBASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 AC023827.1-201ENST00000569247 97 ntBASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC85CA6NKD9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 Y_RNA.273-201ENST00000364703 102 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 RNU6-716P-201ENST00000365621 103 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 SNORA32-201ENST00000384072 121 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 MIR200A-201ENST00000384875 90 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 Y_RNA.649-201ENST00000459077 103 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 MIR4295-201ENST00000585286 85 ntBASIC1.48□□□□□ -2.17
CCDC85CA6NKD9 AL391516.1-201ENST00000554380 2449 ntBASIC1.47□□□□□ -2.17
CCDC85CA6NKD9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.47□□□□□ -2.17
CCDC85CA6NKD9 MIR548A3-201ENST00000385297 97 ntBASIC1.47□□□□□ -2.17
CCDC85CA6NKD9 RNU7-6P-201ENST00000516845 62 ntBASIC1.47□□□□□ -2.17
CCDC85CA6NKD9 SNORD114-10-201ENST00000363409 72 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 SNORA25.8-201ENST00000364831 128 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 SNORD48-201ENST00000364953 64 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1144P-201ENST00000384247 104 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 Y_RNA.629-201ENST00000411368 105 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 snoU13.21-201ENST00000459368 105 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 MIR548AI-201ENST00000579940 88 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC85CA6NKD9 RNU6-476P-201ENST00000384726 107 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1064P-201ENST00000410626 104 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 RNU7-137P-201ENST00000516788 62 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 FAM71BP1-201ENST00000604431 523 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 RNU6-94P-201ENST00000607728 107 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 MIR8087-201ENST00000612745 78 ntBASIC1.45□□□□□ -2.18
CCDC85CA6NKD9 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 RNU6-934P-201ENST00000365154 107 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 AC096949.1-201ENST00000412047 152 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 AC007012.1-201ENST00000567192 175 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 AC211469.2-201ENST00000605461 205 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 AL589743.1-201ENST00000551932 2712 ntBASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
CCDC85CA6NKD9 SNORD114-23-201ENST00000363536 72 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 Y_RNA.344-201ENST00000365381 112 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 Y_RNA.362-201ENST00000365518 110 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1056P-201ENST00000383996 107 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 RPS26P5-201ENST00000418544 335 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 CYP3A137P-201ENST00000562436 69 ntBASIC1.43□□□□□ -2.18
CCDC85CA6NKD9 RNU6-880P-201ENST00000384526 107 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 U8.15-201ENST00000390947 134 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms