Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.8□□□□□ -2.12
SHISA3A0PJX4 MIR3664-201ENST00000579074 99 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 MIR3937-201ENST00000580135 106 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 MIR5588-201ENST00000581890 63 ntBASIC1.8□□□□□ -2.12
SHISA3A0PJX4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHISA3A0PJX4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHISA3A0PJX4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHISA3A0PJX4 RNA5SP289-201ENST00000362332 137 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 U8.2-201ENST00000363156 134 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SHISA3A0PJX4 SNORD78.1-201ENST00000390866 65 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 SNRPGP12-201ENST00000449481 213 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 MIR18B-201ENST00000454574 71 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 AL513043.2-201ENST00000573941 143 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 AC090897.1-201ENST00000580909 226 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
SHISA3A0PJX4 MIR6840-201ENST00000611937 71 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 U6.109-201ENST00000636749 87 ntBASIC1.79□□□□□ -2.12
SHISA3A0PJX4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
SHISA3A0PJX4 ZNF658B-202ENST00000615961 3375 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 RNU6-979P-201ENST00000383896 107 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 RNU6-571P-201ENST00000384128 107 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 RNY1P4-201ENST00000384595 115 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 MIR181B2-201ENST00000385004 89 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 AL161932.1-201ENST00000437408 146 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
SHISA3A0PJX4 RNA5SP133-201ENST00000363368 119 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 RNU6-497P-201ENST00000365316 104 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 RNU6-267P-201ENST00000516714 103 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 MIR8066-201ENST00000617280 78 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 MIR6132-201ENST00000622083 109 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
SHISA3A0PJX4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHISA3A0PJX4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHISA3A0PJX4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.76□□□□□ -2.13
SHISA3A0PJX4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU6-633P-201ENST00000362612 103 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU7-171P-201ENST00000459581 62 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 RNU6-638P-201ENST00000516582 104 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 MIR4500-201ENST00000579472 76 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
SHISA3A0PJX4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SHISA3A0PJX4 RNU6-509P-201ENST00000363519 107 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 RNU6-53P-201ENST00000365367 106 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SHISA3A0PJX4 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 AC025521.1-201ENST00000621624 286 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 MIR6873-201ENST00000622788 63 ntBASIC1.75□□□□□ -2.13
SHISA3A0PJX4 SNORA3.2-201ENST00000408221 125 ntBASIC1.74□□□□□ -2.13
SHISA3A0PJX4 Z98742.3-201ENST00000418637 326 ntBASIC1.74□□□□□ -2.13
SHISA3A0PJX4 RNU6-850P-201ENST00000516934 103 ntBASIC1.74□□□□□ -2.13
SHISA3A0PJX4 uc_338.6-201ENST00000613544 171 ntBASIC1.74□□□□□ -2.13
SHISA3A0PJX4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.73□□□□□ -2.13
SHISA3A0PJX4 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
SHISA3A0PJX4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 MIR1273D-201ENST00000577266 86 ntBASIC1.73□□□□□ -2.13
SHISA3A0PJX4 AC020891.4-201ENST00000605745 93 ntBASIC1.73□□□□□ -2.13
SHISA3A0PJX4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHISA3A0PJX4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.72□□□□□ -2.13
SHISA3A0PJX4 MIR1261-201ENST00000408659 82 ntBASIC1.72□□□□□ -2.13
SHISA3A0PJX4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
SHISA3A0PJX4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.72□□□□□ -2.13
SHISA3A0PJX4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.72□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.72□□□□□ -2.13
SHISA3A0PJX4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RNU6-228P-201ENST00000362700 106 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RNU4-58P-201ENST00000363192 141 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 SNORD93-201ENST00000408813 74 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RNA5SP95-201ENST00000410319 137 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RN7SKP223-201ENST00000410582 62 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms