Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 U4.5-201ENST00000617137 123 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 MT-TY-201ENST00000387409 66 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-130P-201ENST00000411112 103 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 AL445193.1-201ENST00000441183 141 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 MTND4LP30-201ENST00000454092 297 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 RNU7-113P-201ENST00000459273 62 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 RNA5SP33-201ENST00000516687 98 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 AC145423.2-201ENST00000610631 239 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 AC025253.1-201ENST00000613623 543 ntBASIC-1.13□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 SNORD113-8-201ENST00000363497 74 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 RNU4-16P-201ENST00000364737 141 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-901P-201ENST00000384593 106 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 RNU7-195P-201ENST00000458793 62 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 SNORD38.3-201ENST00000516599 73 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
TRAV3A0A0B4J244 RNU4-90P-201ENST00000362773 141 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-524P-201ENST00000384270 107 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-102P-201ENST00000384485 104 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 SNORD63B-201ENST00000411005 70 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 AC098614.3-201ENST00000438957 440 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 SNORA27.4-201ENST00000516650 95 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 AC007012.1-201ENST00000567192 175 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 MIR4460-201ENST00000577862 86 ntBASIC-1.15□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 SNORA32-201ENST00000384072 121 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 RNY1P6-201ENST00000384193 109 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 SNORD116-1-201ENST00000384335 95 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 MIR1468-201ENST00000410600 86 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 MTND4P17-201ENST00000470444 350 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 SNORA20.3-201ENST00000516880 132 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 SNORD116.3-201ENST00000517176 78 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 SNORA40.17-201ENST00000517256 115 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 MIR4500-201ENST00000579472 76 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 AC002553.4-201ENST00000616896 331 ntBASIC-1.16□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-170P-201ENST00000362832 104 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 RNU1-115P-201ENST00000365329 160 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 MIR518B-201ENST00000385127 83 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 SNORA49-201ENST00000386157 136 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-721P-201ENST00000410155 105 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 AP000676.1-201ENST00000533307 52 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 MIR548AE2-201ENST00000583456 67 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 AC006504.6-201ENST00000590142 199 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-86P-201ENST00000606534 107 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 snoU18.1-201ENST00000629629 71 ntBASIC-1.17□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 RNA5SP192-201ENST00000364404 120 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 MT-TT-201ENST00000387460 66 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 SNORD115-46-201ENST00000390982 71 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 RNU7-48P-201ENST00000458875 63 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 MIR2113-201ENST00000459007 91 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 MIR1270-201ENST00000459320 83 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 AL606534.2-204ENST00000635008 178 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 MTND5P18-201ENST00000445624 1801 ntBASIC-1.18□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR601-201ENST00000385256 79 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR616-201ENST00000385293 97 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 AL606845.1-201ENST00000404881 255 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 RNU4-43P-201ENST00000410628 137 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 snoU13.13-201ENST00000458842 104 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR378F-201ENST00000578143 78 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR3179-1-201ENST00000578940 84 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR3179-2-201ENST00000579107 84 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR3179-3-201ENST00000579566 84 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 SNORD58B-201ENST00000607313 66 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 MIR3179-4-201ENST00000617599 84 ntBASIC-1.19□□□□□ -2.6
TRAV3A0A0B4J244 UBE2WP1-201ENST00000362030 340 ntBASIC-1.2□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-845P-201ENST00000362578 103 ntBASIC-1.2□□□□□ -2.6
TRAV3A0A0B4J244 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.2□□□□□ -2.6
TRAV3A0A0B4J244 RNU6-973P-201ENST00000364690 107 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms