Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MIR4781-201ENST00000585250 76 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 AL512598.1-201ENST00000610158 273 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 uc_338.6-201ENST00000613544 171 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNA5SP205-201ENST00000364653 136 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR563-201ENST00000385080 79 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR548A3-201ENST00000385297 97 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU7-79P-201ENST00000516082 62 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU7-35P-201ENST00000517174 62 ntBASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.29□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-735P-201ENST00000410612 107 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORD83.1-201ENST00000411362 77 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 snoU13.21-201ENST00000459368 105 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR4498-201ENST00000577599 66 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORA4-201ENST00000584302 138 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 AL670379.3-201ENST00000605040 251 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR30D-201ENST00000362283 70 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNY4P6-201ENST00000363667 96 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 Y_RNA.563-201ENST00000384707 108 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 MT-TF-201ENST00000387314 71 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR18B-201ENST00000454574 71 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 MTND5P34-201ENST00000568888 325 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR548AI-201ENST00000579940 88 ntBASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
NIPSNAP3AQ9UFN0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNY1P13-201ENST00000365030 105 ntBASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 Y_RNA.353-201ENST00000365440 108 ntBASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR548D2-201ENST00000384955 97 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR548A1-201ENST00000385041 97 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR1270-201ENST00000459320 83 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR4771-2-201ENST00000577758 74 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR4771-1-201ENST00000582617 74 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 FAM71BP1-201ENST00000604431 523 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 AL589743.1-201ENST00000551932 2712 ntBASIC1.25□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-949P-201ENST00000384040 107 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR548I2-201ENST00000408348 149 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC015818.7-201ENST00000428754 109 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC087499.7-201ENST00000441958 109 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 SNORD67.1-201ENST00000516618 108 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC087741.2-201ENST00000619415 172 ntBASIC1.24□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC023934.1-201ENST00000574529 2389 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 Y_RNA.291-201ENST00000364886 113 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-616P-201ENST00000384353 107 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 RPS29P28-201ENST00000446439 141 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 AC007012.1-201ENST00000567192 175 ntBASIC1.23□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
NIPSNAP3AQ9UFN0 MIR1257-201ENST00000408490 117 ntBASIC1.22□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.22□□□□□ -2.21
NIPSNAP3AQ9UFN0 SNORD93-201ENST00000408813 74 ntBASIC1.22□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-1064P-201ENST00000410626 104 ntBASIC1.22□□□□□ -2.21
NIPSNAP3AQ9UFN0 RNU6-1056P-201ENST00000383996 107 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-476P-201ENST00000384726 107 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 U8.15-201ENST00000390947 134 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 RPS26P5-201ENST00000418544 335 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC105081.1-201ENST00000617727 106 ntBASIC1.21□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD115-19-201ENST00000363098 82 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD115-18-201ENST00000363293 82 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD114-10-201ENST00000363409 72 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD115-17-201ENST00000364612 82 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-1144P-201ENST00000384247 104 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD116-21-201ENST00000384507 92 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR200A-201ENST00000384875 90 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 302.3 ms