Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU7-171P-201ENST00000459581 62 ntBASIC2.08□□□□□ -2.08
SSU72Q9NP77 RNA5SP356-201ENST00000515972 94 ntBASIC2.08□□□□□ -2.08
SSU72Q9NP77 MIR4513-201ENST00000581077 86 ntBASIC2.08□□□□□ -2.08
SSU72Q9NP77 AC012676.2-201ENST00000619258 186 ntBASIC2.08□□□□□ -2.08
SSU72Q9NP77 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
SSU72Q9NP77 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
SSU72Q9NP77 RNA5SP48-201ENST00000363969 126 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 Y_RNA.191-201ENST00000363972 113 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 RNU6-949P-201ENST00000384040 107 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 MIR6740-201ENST00000618268 113 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 AP001362.1-201ENST00000625165 124 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 MIR3202-2-201ENST00000635980 79 ntBASIC2.07□□□□□ -2.08
SSU72Q9NP77 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
SSU72Q9NP77 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SSU72Q9NP77 SNORA2B-201ENST00000384583 137 ntBASIC2.06□□□□□ -2.08
SSU72Q9NP77 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.06□□□□□ -2.08
SSU72Q9NP77 SPINT5P-201ENST00000448174 155 ntBASIC2.06□□□□□ -2.08
SSU72Q9NP77 MIR4666B-201ENST00000578142 81 ntBASIC2.06□□□□□ -2.08
SSU72Q9NP77 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SSU72Q9NP77 WWP1P1-201ENST00000466609 2769 ntBASIC2.06□□□□□ -2.08
SSU72Q9NP77 HSBP1P2-201ENST00000299671 229 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 Y_RNA.4-201ENST00000362333 112 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 SNORA80A-201ENST00000363922 136 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 RNU6-242P-201ENST00000384359 107 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 Y_RNA.500-201ENST00000384466 111 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 MIR588-201ENST00000384900 83 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 MIR181B2-201ENST00000385004 89 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SSU72Q9NP77 Y_RNA.609-201ENST00000410669 89 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 SNORA59A-201ENST00000459326 152 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 AC008413.1-201ENST00000511864 177 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 AL513043.2-201ENST00000573941 143 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 uc_338.6-201ENST00000613544 171 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 AC025521.1-201ENST00000621624 286 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 AC006160.2-201ENST00000637708 154 ntBASIC2.05□□□□□ -2.08
SSU72Q9NP77 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
SSU72Q9NP77 MIR30D-201ENST00000362283 70 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 RNU6-633P-201ENST00000362612 103 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 Y_RNA.313-201ENST00000365095 103 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 RNA5SP237-201ENST00000410414 113 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 AC027119.1-201ENST00000440877 241 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 HSPE1P24-201ENST00000450782 238 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 AC138749.4-201ENST00000563970 127 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 GHRLOS.1-201ENST00000610995 70 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 MIR548BB-201ENST00000626714 66 ntBASIC2.04□□□□□ -2.08
SSU72Q9NP77 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSU72Q9NP77 MIR302D-201ENST00000362275 68 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 RNU6-509P-201ENST00000363519 107 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 RNY1P2-201ENST00000364820 117 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 Y_RNA.510-201ENST00000384511 114 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SSU72Q9NP77 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.08
SSU72Q9NP77 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.03□□□□□ -2.08
SSU72Q9NP77 SNORD115-27-201ENST00000364430 82 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 MIR1185-1-201ENST00000408598 86 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.02□□□□□ -2.09
SSU72Q9NP77 MTND5P40-201ENST00000559945 246 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 AL357312.1-201ENST00000603879 298 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 MIR8074-201ENST00000615081 81 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 MIR6516-201ENST00000630554 81 ntBASIC2.02□□□□□ -2.09
SSU72Q9NP77 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
SSU72Q9NP77 RNA5SP133-201ENST00000363368 119 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 RNU6-396P-201ENST00000365369 105 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 RNU4-83P-201ENST00000410863 133 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 AC005908.1-201ENST00000468701 347 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 AC133485.1-201ENST00000567176 124 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
SSU72Q9NP77 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SSU72Q9NP77 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 Y_RNA.168-201ENST00000363740 102 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 SNORD38.2-201ENST00000384470 69 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 Y_RNA.611-201ENST00000410682 108 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 AC090897.1-201ENST00000580909 226 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 MIR6852-201ENST00000621699 66 ntBASIC2□□□□□ -2.09
SSU72Q9NP77 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
SSU72Q9NP77 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SSU72Q9NP77 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSU72Q9NP77 Y_RNA.437-201ENST00000384113 113 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 RNU6-205P-201ENST00000390858 107 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 AC245517.4-201ENST00000448601 281 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 UBE2DNL-203ENST00000474922 222 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 AL133373.1-201ENST00000497098 94 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 RNU6-947P-201ENST00000516264 106 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 MIR4264-201ENST00000583520 66 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
SSU72Q9NP77 RNU6-1125P-201ENST00000363601 107 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 Y_RNA.426-201ENST00000384068 113 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 MT-TN-201ENST00000387400 73 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 RNU6-279P-201ENST00000391297 101 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms