Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 MIR548I2-201ENST00000408348 149 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 RNU6-126P-201ENST00000516685 103 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 RNU7-70P-201ENST00000516941 66 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 AL359880.1-201ENST00000621879 266 ntBASIC-1.69□□□□□ -2.68
VPS25Q9BRG1 RNU4-32P-201ENST00000363404 141 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 RNU6-584P-201ENST00000410350 95 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 RNA5SP144-201ENST00000410846 116 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 AC096644.2-201ENST00000429278 159 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 RPS3AP52-201ENST00000435639 297 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 MIR1270-201ENST00000459320 83 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 AC138207.3-201ENST00000585289 166 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 AL050303.3-201ENST00000613704 284 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 AC024614.3-201ENST00000637860 256 ntBASIC-1.7□□□□□ -2.68
VPS25Q9BRG1 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 MIR548F5-201ENST00000408421 86 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 RNU6-893P-201ENST00000458841 100 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 NBR2-204ENST00000587322 63 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 AL008718.3-201ENST00000610217 321 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 MIR4320-201ENST00000636981 65 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 MIR6086-201ENST00000638065 55 ntBASIC-1.71□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-937P-201ENST00000384325 106 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-21P-201ENST00000384710 107 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 MIR548E-201ENST00000408287 88 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 AL161932.1-201ENST00000437408 146 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-764P-201ENST00000516396 105 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 RNU6-762P-201ENST00000517107 102 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 AL442663.2-201ENST00000554385 511 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 U2.1-201ENST00000618978 145 ntBASIC-1.72□□□□□ -2.68
VPS25Q9BRG1 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 MIR124-2-201ENST00000385081 109 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 RNU6-592P-201ENST00000411333 103 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 RNU7-48P-201ENST00000458875 63 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 MRPS35P2-201ENST00000508242 191 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 MIR5692C2-201ENST00000577959 77 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 AC005899.2-201ENST00000584353 90 ntBASIC-1.73□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 MIR628-201ENST00000385229 95 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 RNU6-956P-201ENST00000458868 103 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 AC019235.1-201ENST00000503847 207 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 AC097639.2-201ENST00000603159 172 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 AC124864.2-201ENST00000624736 186 ntBASIC-1.74□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 SNORD115-20-201ENST00000365099 82 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 RNU6-507P-201ENST00000516045 100 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 AC026421.1-201ENST00000519101 163 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 AC144568.1-201ENST00000520139 137 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 AC138305.3-201ENST00000624988 240 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 snoR1.1-201ENST00000628177 80 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 U6.100-201ENST00000636230 99 ntBASIC-1.75□□□□□ -2.69
VPS25Q9BRG1 MTND5P26-201ENST00000426018 1752 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 RNU6-593P-201ENST00000364716 112 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 MIR206-201ENST00000384872 86 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 MIR516A2-201ENST00000384888 90 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 MIR516A1-201ENST00000385033 90 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 PISRT1.1-201ENST00000616930 107 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 AL603755.1-201ENST00000619504 163 ntBASIC-1.76□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.77□□□□□ -2.69
VPS25Q9BRG1 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.77□□□□□ -2.69
VPS25Q9BRG1 MIR548K-201ENST00000408406 116 ntBASIC-1.77□□□□□ -2.69
VPS25Q9BRG1 HLA-S-202ENST00000425174 53 ntBASIC-1.77□□□□□ -2.69
VPS25Q9BRG1 SNORD57-201ENST00000448188 72 ntBASIC-1.77□□□□□ -2.69
VPS25Q9BRG1 SNRPGP8-201ENST00000454064 226 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms