Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 MIR145-201ENST00000384967 88 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 RNU6-381P-201ENST00000391259 108 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 MIR548P-201ENST00000408336 84 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 AL442663.2-201ENST00000554385 511 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 MTND5P32-201ENST00000560711 1802 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RNU6-923P-201ENST00000364753 107 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RPL39P34-201ENST00000477141 156 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 DEFB131E-201ENST00000532329 154 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 AC067863.3-201ENST00000624172 122 ntBASIC-0.18□□□□□ -2.44
CCDC43Q96MW1 SNORA2A-201ENST00000383885 135 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 RNU6-531P-201ENST00000516694 104 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 AC141557.1-201ENST00000540982 400 ntBASIC-0.19□□□□□ -2.44
CCDC43Q96MW1 SNORA63.5-201ENST00000363548 123 ntBASIC-0.2□□□□□ -2.44
CCDC43Q96MW1 RNU6V-201ENST00000384105 107 ntBASIC-0.2□□□□□ -2.44
CCDC43Q96MW1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.2□□□□□ -2.44
CCDC43Q96MW1 RNU7-79P-201ENST00000516082 62 ntBASIC-0.2□□□□□ -2.44
CCDC43Q96MW1 MIR3171-201ENST00000584270 74 ntBASIC-0.2□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.21□□□□□ -2.44
CCDC43Q96MW1 RNU6-893P-201ENST00000458841 100 ntBASIC-0.21□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.21□□□□□ -2.44
CCDC43Q96MW1 U2.14-201ENST00000615943 113 ntBASIC-0.21□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 MIR548H2-201ENST00000408874 88 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 RNU4-43P-201ENST00000410628 137 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 MTATP6P23-201ENST00000440153 476 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 SNORD116-25-201ENST00000516517 92 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 SCARNA15-202ENST00000516881 127 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.22□□□□□ -2.44
CCDC43Q96MW1 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.23□□□□□ -2.45
CCDC43Q96MW1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.23□□□□□ -2.45
CCDC43Q96MW1 MIR4282-201ENST00000583613 67 ntBASIC-0.23□□□□□ -2.45
CCDC43Q96MW1 MIR4743-201ENST00000584576 69 ntBASIC-0.23□□□□□ -2.45
CCDC43Q96MW1 RNU1-29P-201ENST00000606574 126 ntBASIC-0.23□□□□□ -2.45
CCDC43Q96MW1 RNU4-58P-201ENST00000363192 141 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 RNA5SP133-201ENST00000363368 119 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 RNU4-17P-201ENST00000365598 141 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 AL121914.1-201ENST00000450188 156 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 AC020661.2-201ENST00000560114 134 ntBASIC-0.24□□□□□ -2.45
CCDC43Q96MW1 RNU6-978P-201ENST00000364371 103 ntBASIC-0.25□□□□□ -2.45
CCDC43Q96MW1 RNU6-985P-201ENST00000410182 104 ntBASIC-0.25□□□□□ -2.45
CCDC43Q96MW1 AP003072.1-201ENST00000531740 145 ntBASIC-0.25□□□□□ -2.45
CCDC43Q96MW1 MIR378D2-201ENST00000580636 98 ntBASIC-0.25□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.26□□□□□ -2.45
CCDC43Q96MW1 RNU6-103P-201ENST00000363686 107 ntBASIC-0.26□□□□□ -2.45
CCDC43Q96MW1 MIR101-2-201ENST00000362195 79 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 RNU4-70P-201ENST00000384579 139 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 RNU7-35P-201ENST00000517174 62 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 AC138869.1-201ENST00000568623 124 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 U6.109-201ENST00000636749 87 ntBASIC-0.27□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 MIR4744-201ENST00000581563 82 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 MIR6759-201ENST00000638110 65 ntBASIC-0.28□□□□□ -2.45
CCDC43Q96MW1 MIR335-201ENST00000362173 94 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 RNU6-713P-201ENST00000384761 107 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 MIR624-201ENST00000385217 97 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 MIR892B-201ENST00000401279 77 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 MIR548L-201ENST00000408303 86 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 AC108059.2-201ENST00000434626 151 ntBASIC-0.29□□□□□ -2.46
CCDC43Q96MW1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNU6-726P-201ENST00000364680 107 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNU6-702P-201ENST00000364982 107 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 SNORA32-201ENST00000384072 121 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms