Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 MT-TF-201ENST00000387314 71 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 SNORA11.1-201ENST00000408133 129 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 RPS29P28-201ENST00000446439 141 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 Y_RNA.659-201ENST00000515994 113 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 SNORA31.2-201ENST00000516019 134 ntBASIC2.21□□□□□ -2.06
CALR3Q96L12 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
CALR3Q96L12 Y_RNA.466-201ENST00000384294 113 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 MIR34C-201ENST00000384831 77 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 MIR483-201ENST00000385070 76 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 RNA5SP95-201ENST00000410319 137 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 RPL23AP83-201ENST00000434984 473 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 MIR376B-201ENST00000614515 100 ntBASIC2.2□□□□□ -2.06
CALR3Q96L12 Y_RNA.168-201ENST00000363740 102 ntBASIC2.19□□□□□ -2.06
CALR3Q96L12 SNORD38.1-201ENST00000363863 68 ntBASIC2.19□□□□□ -2.06
CALR3Q96L12 AC096949.1-201ENST00000412047 152 ntBASIC2.19□□□□□ -2.06
CALR3Q96L12 AL356320.1-201ENST00000429616 163 ntBASIC2.19□□□□□ -2.06
CALR3Q96L12 MIR5582-201ENST00000579697 68 ntBASIC2.19□□□□□ -2.06
CALR3Q96L12 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CALR3Q96L12 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CALR3Q96L12 RNU6-170P-201ENST00000362832 104 ntBASIC2.18□□□□□ -2.06
CALR3Q96L12 RNU6-1006P-201ENST00000516998 103 ntBASIC2.18□□□□□ -2.06
CALR3Q96L12 AC012531.4-201ENST00000616509 177 ntBASIC2.18□□□□□ -2.06
CALR3Q96L12 AP001362.1-201ENST00000625165 124 ntBASIC2.18□□□□□ -2.06
CALR3Q96L12 Y_RNA.330-201ENST00000365230 109 ntBASIC2.17□□□□□ -2.06
CALR3Q96L12 SNORA2B-201ENST00000384583 137 ntBASIC2.17□□□□□ -2.06
CALR3Q96L12 AC004941.2-201ENST00000427009 228 ntBASIC2.17□□□□□ -2.06
CALR3Q96L12 MIR18B-201ENST00000454574 71 ntBASIC2.17□□□□□ -2.06
CALR3Q96L12 RNU6-795P-201ENST00000516323 103 ntBASIC2.17□□□□□ -2.06
CALR3Q96L12 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CALR3Q96L12 Y_RNA.95-201ENST00000363079 95 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 RNY1P2-201ENST00000364820 117 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 SNORD38.2-201ENST00000384470 69 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 MIR4439-201ENST00000583746 80 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 uc_338.6-201ENST00000613544 171 ntBASIC2.16□□□□□ -2.06
CALR3Q96L12 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.16□□□□□ -2.06
CALR3Q96L12 Y_RNA.140-201ENST00000363474 103 ntBASIC2.15□□□□□ -2.07
CALR3Q96L12 Y_RNA.247-201ENST00000364500 92 ntBASIC2.15□□□□□ -2.07
CALR3Q96L12 Y_RNA.369-201ENST00000365568 117 ntBASIC2.15□□□□□ -2.07
CALR3Q96L12 U8.15-201ENST00000390947 134 ntBASIC2.15□□□□□ -2.07
CALR3Q96L12 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
CALR3Q96L12 Y_RNA.96-201ENST00000363092 109 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 SNORD113.3-201ENST00000364630 78 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 SNORA75.2-201ENST00000391138 150 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 SNORA75.3-201ENST00000391231 150 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 MIR4285-201ENST00000581001 85 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 AC012676.2-201ENST00000619258 186 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 AC091304.10-201ENST00000641554 121 ntBASIC2.14□□□□□ -2.07
CALR3Q96L12 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
CALR3Q96L12 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 RNU6-60P-201ENST00000364792 103 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 Y_RNA.363-201ENST00000365529 113 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 AL591704.2-201ENST00000421658 181 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 MIR4777-201ENST00000583710 86 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 MIR6873-201ENST00000622788 63 ntBASIC2.13□□□□□ -2.07
CALR3Q96L12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CALR3Q96L12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CALR3Q96L12 MRPL35P3-201ENST00000421557 364 ntBASIC2.12□□□□□ -2.07
CALR3Q96L12 AC006254.2-201ENST00000603259 279 ntBASIC2.12□□□□□ -2.07
CALR3Q96L12 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
CALR3Q96L12 SNORA80D-201ENST00000384488 135 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 AC036111.3-201ENST00000526389 112 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 AC138749.4-201ENST00000563970 127 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 MIR548Z-201ENST00000584743 97 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 RNU6-90P-201ENST00000606352 106 ntBASIC2.11□□□□□ -2.07
CALR3Q96L12 Y_RNA.220-201ENST00000364244 109 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 RNU6-1131P-201ENST00000364955 107 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 MIR488-201ENST00000365739 83 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 RNU6-910P-201ENST00000390844 107 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 RNU6-644P-201ENST00000391155 98 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 MIR548G-201ENST00000408442 89 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 AC109327.2-201ENST00000448339 378 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 RNU7-61P-201ENST00000515897 61 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 MIR3122-201ENST00000577243 73 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 MALAT1.1-201ENST00000618249 95 ntBASIC2.1□□□□□ -2.07
CALR3Q96L12 Y_RNA.342-201ENST00000365352 113 ntBASIC2.09□□□□□ -2.07
CALR3Q96L12 RNU7-21P-201ENST00000459430 62 ntBASIC2.09□□□□□ -2.07
CALR3Q96L12 Y_RNA.705-201ENST00000516862 110 ntBASIC2.09□□□□□ -2.07
CALR3Q96L12 MTND5P40-201ENST00000559945 246 ntBASIC2.09□□□□□ -2.07
CALR3Q96L12 U6.109-201ENST00000636749 87 ntBASIC2.09□□□□□ -2.07
CALR3Q96L12 RNA5SP133-201ENST00000363368 119 ntBASIC2.08□□□□□ -2.08
CALR3Q96L12 SNORD111-201ENST00000408139 94 ntBASIC2.08□□□□□ -2.08
CALR3Q96L12 SNORD93-201ENST00000408813 74 ntBASIC2.08□□□□□ -2.08
CALR3Q96L12 SPINT5P-201ENST00000448174 155 ntBASIC2.08□□□□□ -2.08
CALR3Q96L12 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
CALR3Q96L12 RNU6-1163P-201ENST00000364516 107 ntBASIC2.07□□□□□ -2.08
CALR3Q96L12 Y_RNA.467-201ENST00000384297 102 ntBASIC2.07□□□□□ -2.08
CALR3Q96L12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CALR3Q96L12 SNORD79.1-201ENST00000516069 84 ntBASIC2.07□□□□□ -2.08
CALR3Q96L12 AC106800.4-201ENST00000614905 153 ntBASIC2.07□□□□□ -2.08
CALR3Q96L12 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms