Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 RNA5SP48-201ENST00000363969 126 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 MIR577-201ENST00000385196 96 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 RNU6-679P-201ENST00000391003 106 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 SCARNA23-201ENST00000516060 130 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 MIR4694-201ENST00000578534 80 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 AL512310.12-203ENST00000640543 90 ntBASIC1.54□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.10-201ENST00000362371 110 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.107-201ENST00000363190 121 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 RNU6-832P-201ENST00000363319 107 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 Y_RNA.601-201ENST00000410500 113 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 RNU7-35P-201ENST00000517174 62 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 AL096861.1-201ENST00000610899 123 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
PDLIM2Q96JY6 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 Y_RNA.93-201ENST00000363066 109 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 RNU6-1131P-201ENST00000364955 107 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 MTATP8P2-201ENST00000435212 202 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 AL353813.1-201ENST00000440700 253 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 RNU7-79P-201ENST00000516082 62 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 MIR2052-201ENST00000636055 55 ntBASIC1.52□□□□□ -2.17
PDLIM2Q96JY6 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 SNORD115-35-201ENST00000365122 82 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 RNU7-2P-201ENST00000516096 62 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 RNU6-158P-201ENST00000517104 100 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
PDLIM2Q96JY6 RNA5SP237-201ENST00000410414 113 ntBASIC1.5□□□□□ -2.17
PDLIM2Q96JY6 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
PDLIM2Q96JY6 RNU6-1018P-201ENST00000516577 106 ntBASIC1.5□□□□□ -2.17
PDLIM2Q96JY6 SNORD67.1-201ENST00000516618 108 ntBASIC1.5□□□□□ -2.17
PDLIM2Q96JY6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
PDLIM2Q96JY6 MIR488-201ENST00000365739 83 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 RNU6-1201P-201ENST00000384227 107 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 RNU6-49P-201ENST00000384256 107 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 MIR206-201ENST00000384872 86 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 AC244023.1-201ENST00000426884 112 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 RNU6-795P-201ENST00000516323 103 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 AC242498.1-201ENST00000604134 111 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 AC105081.1-201ENST00000617727 106 ntBASIC1.49□□□□□ -2.17
PDLIM2Q96JY6 RNU6-1313P-201ENST00000362622 102 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 RNU6-170P-201ENST00000362832 104 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 Y_RNA.220-201ENST00000364244 109 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 RNU6-396P-201ENST00000365369 105 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 AC079140.2-201ENST00000506193 142 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 AP000942.3-201ENST00000603702 160 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 AL442128.1-201ENST00000615151 90 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 AC012531.4-201ENST00000616509 177 ntBASIC1.48□□□□□ -2.17
PDLIM2Q96JY6 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 SNORD45B-201ENST00000364617 72 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 RNU6-294P-201ENST00000364999 102 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 Y_RNA.377-201ENST00000365644 108 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 SNORA17.3-201ENST00000391159 129 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 MIR1302-7-201ENST00000408841 72 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 RNU7-137P-201ENST00000516788 62 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 AC096720.1-201ENST00000604441 183 ntBASIC1.47□□□□□ -2.17
PDLIM2Q96JY6 SNORD114-10-201ENST00000363409 72 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 RNY1P13-201ENST00000365030 105 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 RNY1P7-201ENST00000384743 110 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 UBL5P1-201ENST00000507979 193 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 AC141846.1-201ENST00000568348 142 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 MIR548Z-201ENST00000584743 97 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 MALAT1.1-201ENST00000618249 95 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 AC091304.10-201ENST00000641554 121 ntBASIC1.46□□□□□ -2.18
PDLIM2Q96JY6 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 RNU6-865P-201ENST00000364772 107 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 Y_RNA.342-201ENST00000365352 113 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 MIR588-201ENST00000384900 83 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
PDLIM2Q96JY6 RNU6-644P-201ENST00000391155 98 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 318.5 ms