Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 IGKV1-22-201ENST00000524313 326 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 MIR4264-201ENST00000583520 66 ntBASIC1.58□□□□□ -2.16
SMC1BQ8NDV3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 AC113410.1-201ENST00000505029 247 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 RNU6-313P-201ENST00000516317 112 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 RNU6-479P-201ENST00000516348 105 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 RNU6-781P-201ENST00000516377 101 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 RNU2-35P-201ENST00000516446 142 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 AC025166.1-201ENST00000612411 163 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 SEPT14P17-201ENST00000617978 177 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 MIR6516-201ENST00000630554 81 ntBASIC1.57□□□□□ -2.16
SMC1BQ8NDV3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 SNORA80D-201ENST00000384488 135 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 RNU6-910P-201ENST00000390844 107 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 RNU6-1154P-201ENST00000391001 104 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 RNU6-613P-201ENST00000410412 108 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 AC004812.1-201ENST00000540773 146 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 AL365222.1-201ENST00000614661 98 ntBASIC1.56□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 RNU6-1081P-201ENST00000384537 107 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 MIR193B-201ENST00000384907 83 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 RNU6-1168P-201ENST00000390831 104 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 COX6CP6-201ENST00000490840 228 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 SNORA70.22-201ENST00000517160 124 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 U6.95-201ENST00000636931 70 ntBASIC1.55□□□□□ -2.16
SMC1BQ8NDV3 MIR377-201ENST00000362145 69 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 RNU2-51P-201ENST00000410708 197 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 MRPL35P3-201ENST00000421557 364 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 AL512326.2-201ENST00000426359 151 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 RNA5SP33-201ENST00000516687 98 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 MIR1273G-201ENST00000577677 100 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 AL359881.1-201ENST00000602916 267 ntBASIC1.54□□□□□ -2.16
SMC1BQ8NDV3 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
SMC1BQ8NDV3 SNORD115-20-201ENST00000365099 82 ntBASIC1.53□□□□□ -2.16
SMC1BQ8NDV3 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
SMC1BQ8NDV3 MIR3914-2-201ENST00000637339 95 ntBASIC1.53□□□□□ -2.16
SMC1BQ8NDV3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.261-201ENST00000364631 102 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 SNORD12C-201ENST00000386307 89 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 SNORA75.2-201ENST00000391138 150 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 SNORA75.3-201ENST00000391231 150 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 RNA5SP237-201ENST00000410414 113 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 AC244023.1-201ENST00000426884 112 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 AC242498.1-201ENST00000604134 111 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 MTND5P18-201ENST00000445624 1801 ntBASIC1.52□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 RNU6-205P-201ENST00000390858 107 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 SNORD12-201ENST00000391002 90 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 RNU7-90P-201ENST00000459216 62 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 SNORD79.1-201ENST00000516069 84 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 MIR548AI-201ENST00000579940 88 ntBASIC1.51□□□□□ -2.17
SMC1BQ8NDV3 RNU6-654P-201ENST00000364373 107 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 SNORA2B-201ENST00000384583 137 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 MIR588-201ENST00000384900 83 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 RNU7-62P-201ENST00000458856 62 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 snoU13.2-201ENST00000459201 104 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 RNU7-21P-201ENST00000459430 62 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 AC087343.1-201ENST00000477341 475 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 RPS23P4-201ENST00000487908 423 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 MIR3163-201ENST00000581592 73 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 MIR4295-201ENST00000585286 85 ntBASIC1.5□□□□□ -2.17
SMC1BQ8NDV3 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.115-201ENST00000363272 98 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 RNA5SP205-201ENST00000364653 136 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 SNORA22C-201ENST00000384614 134 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 SNORD77B-201ENST00000391112 67 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 RNA5SP395-201ENST00000516567 118 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 AC022523.2-201ENST00000561045 150 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 AL590095.2-201ENST00000604136 117 ntBASIC1.49□□□□□ -2.17
SMC1BQ8NDV3 SNORD113.3-201ENST00000364630 78 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 MIR548I2-201ENST00000408348 149 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 RNA5SP95-201ENST00000410319 137 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 RNU4-69P-201ENST00000410677 143 ntBASIC1.48□□□□□ -2.17
SMC1BQ8NDV3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.47□□□□□ -2.17
SMC1BQ8NDV3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.47□□□□□ -2.17
SMC1BQ8NDV3 MIR548AE2-201ENST00000583456 67 ntBASIC1.47□□□□□ -2.17
SMC1BQ8NDV3 RNY4P6-201ENST00000363667 96 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 MIR548A3-201ENST00000385297 97 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 422.8 ms