Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNU5E-9P-201ENST00000411164 104 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNA5SP94-201ENST00000516917 108 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNU6-1271P-201ENST00000517049 105 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNU2-60P-201ENST00000517290 128 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 AC141273.2-201ENST00000618989 130 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 AC078938.1-201ENST00000620993 318 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
CCDC63Q8NA47 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC63Q8NA47 RNY1P11-201ENST00000363759 113 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNU6-818P-201ENST00000364837 108 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.497-201ENST00000384447 98 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 SNORA75.5-201ENST00000391291 81 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 MIR1276-201ENST00000408707 83 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNU7-121P-201ENST00000516604 62 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 RNU7-35P-201ENST00000517174 62 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 AC072026.1-201ENST00000605023 201 ntBASIC0.42□□□□□ -2.34
CCDC63Q8NA47 SNORD115-2-201ENST00000362842 82 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 RNU6-403P-201ENST00000363163 104 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 RNU4-84P-201ENST00000364200 139 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 SNORD115-20-201ENST00000365099 82 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 MT-TG-201ENST00000387429 68 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 RNU6-239P-201ENST00000390990 99 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 RNU6-588P-201ENST00000410281 105 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC63Q8NA47 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 MIR3658-201ENST00000636291 56 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
CCDC63Q8NA47 Y_RNA.120-201ENST00000363304 110 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 SNORA25.9-201ENST00000365087 128 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNA5SP117-201ENST00000365294 118 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 SNORD114-22-201ENST00000365423 72 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.793-201ENST00000411222 111 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 AL512326.2-201ENST00000426359 151 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU7-113P-201ENST00000459273 62 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU7-79P-201ENST00000516082 62 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU6-765P-201ENST00000516916 99 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU6-388P-201ENST00000517012 105 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 RNU6-389P-201ENST00000517048 105 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 MIR3646-201ENST00000578301 84 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 MIR6844-201ENST00000637122 62 ntBASIC0.4□□□□□ -2.35
CCDC63Q8NA47 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.240-201ENST00000364469 95 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 RNU6-690P-201ENST00000365242 106 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.401-201ENST00000383965 117 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 AL022718.1-201ENST00000412004 84 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 RPS29P1-201ENST00000465274 159 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 RNU2-35P-201ENST00000516446 142 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 AP002392.1-201ENST00000537692 208 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 MIR4452-201ENST00000583004 71 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 MIR6788-201ENST00000618842 66 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 uc_338.16-201ENST00000621804 95 ntBASIC0.39□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.32-201ENST00000362589 110 ntBASIC0.38□□□□□ -2.35
CCDC63Q8NA47 RNU6-200P-201ENST00000364743 107 ntBASIC0.38□□□□□ -2.35
CCDC63Q8NA47 RNU6-138P-201ENST00000515952 107 ntBASIC0.38□□□□□ -2.35
CCDC63Q8NA47 MIR151B-201ENST00000584249 96 ntBASIC0.38□□□□□ -2.35
CCDC63Q8NA47 AC011603.4-201ENST00000611325 277 ntBASIC0.38□□□□□ -2.35
CCDC63Q8NA47 RNU6-508P-201ENST00000363231 103 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 SNORA36.1-201ENST00000363424 132 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 RNU6-682P-201ENST00000363843 106 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.357-201ENST00000365487 109 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 SNORA72.6-201ENST00000384520 129 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 RNU7-120P-201ENST00000459334 63 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 RNU6-240P-201ENST00000516098 97 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 RNA5SP33-201ENST00000516687 98 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 MIR5000-201ENST00000577717 103 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 MIR4305-201ENST00000583252 102 ntBASIC0.37□□□□□ -2.35
CCDC63Q8NA47 SNORA32-201ENST00000384072 121 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.552-201ENST00000384665 112 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 RNU6-291P-201ENST00000384720 107 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CCDC63Q8NA47 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.651-201ENST00000459380 103 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 RNU6-861P-201ENST00000516745 106 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 MTND5P34-201ENST00000568888 325 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 MIR548AE2-201ENST00000583456 67 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 DNAJC19P2-201ENST00000593340 302 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 MIR8070-201ENST00000616510 88 ntBASIC0.36□□□□□ -2.35
CCDC63Q8NA47 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 RNA5SP432-201ENST00000362480 116 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms