Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 snoU13.21-201ENST00000459368 105 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 RNU6-255P-201ENST00000516957 105 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 MIR548X2-201ENST00000579776 100 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
RTL3Q8N8U3 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 MIR30D-201ENST00000362283 70 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 Y_RNA.8-201ENST00000362353 102 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 SNORD115-2-201ENST00000362842 82 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 RNU6-508P-201ENST00000363231 103 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 RNU6-309P-201ENST00000364573 106 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 SNORD115-20-201ENST00000365099 82 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 SNORA20-201ENST00000384662 132 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 MIR588-201ENST00000384900 83 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 MIR1827-201ENST00000408549 66 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 AC113410.1-201ENST00000505029 247 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.72□□□□□ -2.29
RTL3Q8N8U3 RNU4-16P-201ENST00000364737 141 ntBASIC0.71□□□□□ -2.3
RTL3Q8N8U3 MT-TF-201ENST00000387314 71 ntBASIC0.71□□□□□ -2.3
RTL3Q8N8U3 MIR513C-201ENST00000401352 84 ntBASIC0.71□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.690-201ENST00000516603 95 ntBASIC0.71□□□□□ -2.3
RTL3Q8N8U3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
RTL3Q8N8U3 MIR3121-201ENST00000579680 77 ntBASIC0.71□□□□□ -2.3
RTL3Q8N8U3 RNU6-690P-201ENST00000365242 106 ntBASIC0.7□□□□□ -2.3
RTL3Q8N8U3 SNORD18B-201ENST00000365659 72 ntBASIC0.7□□□□□ -2.3
RTL3Q8N8U3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
RTL3Q8N8U3 RNU6-460P-201ENST00000391158 108 ntBASIC0.7□□□□□ -2.3
RTL3Q8N8U3 AL662814.1-201ENST00000617364 121 ntBASIC0.7□□□□□ -2.3
RTL3Q8N8U3 RNU6-915P-201ENST00000364943 103 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 RNU6-934P-201ENST00000365154 107 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.420-201ENST00000384043 110 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 SNORD99-201ENST00000408612 74 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 SNORA25.12-201ENST00000516202 82 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 RNU2-35P-201ENST00000516446 142 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 MIR4305-201ENST00000583252 102 ntBASIC0.69□□□□□ -2.3
RTL3Q8N8U3 AC010332.2-201ENST00000613083 1904 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.488-201ENST00000384403 102 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 SNORD83.1-201ENST00000411362 77 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 AC108081.1-201ENST00000604358 221 ntBASIC0.68□□□□□ -2.3
RTL3Q8N8U3 RNU6-1062P-201ENST00000383908 107 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AL022718.1-201ENST00000412004 84 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC096949.1-201ENST00000412047 152 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 RNU6-426P-201ENST00000516464 97 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.692-201ENST00000516627 105 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 RNU7-35P-201ENST00000517174 62 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AP001328.1-201ENST00000528550 176 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC133485.4-201ENST00000561835 220 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC141846.1-201ENST00000568348 142 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC138907.4-201ENST00000570107 226 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
RTL3Q8N8U3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.67□□□□□ -2.3
RTL3Q8N8U3 MIR1-1-201ENST00000362147 71 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 RNU6-949P-201ENST00000384040 107 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 RNU6-342P-201ENST00000384521 104 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 AL512326.2-201ENST00000426359 151 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 RNU7-123P-201ENST00000515911 60 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 IGKV1-22-201ENST00000524313 326 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 AC021443.1-201ENST00000604478 211 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 U7.2-201ENST00000607576 63 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.66□□□□□ -2.3
RTL3Q8N8U3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 SNORA18-201ENST00000384416 132 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 RNU7-185P-201ENST00000459215 60 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 RNU7-164P-201ENST00000459221 62 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 RNU7-113P-201ENST00000459273 62 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 MIR4804-201ENST00000581683 73 ntBASIC0.65□□□□□ -2.31
RTL3Q8N8U3 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms