Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 RNU6-602P-201ENST00000411155 105 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 AL022718.1-201ENST00000412004 84 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 RNU11-2P-201ENST00000516898 142 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 MIR4679-2-201ENST00000578358 77 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 SEPT14P17-201ENST00000617978 177 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 AC008163.1-202ENST00000636004 2889 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 SNORA7.1-201ENST00000363750 139 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 SNORA25-201ENST00000384384 134 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 SNORA26.6-201ENST00000391256 115 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 POLR2J4-204ENST00000418424 324 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 AC023827.1-201ENST00000569247 97 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 MIR3613-201ENST00000579844 87 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.6□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 SNORA25.8-201ENST00000364831 128 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 SNORD12C-201ENST00000386307 89 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 RNU6-893P-201ENST00000458841 100 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 uc_338.28-201ENST00000612082 187 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 MIR6841-201ENST00000637129 72 ntBASIC1.59□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 RNU6-106P-201ENST00000384405 107 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 MIR1276-201ENST00000408707 83 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 AL512326.2-201ENST00000426359 151 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 SNORD79.1-201ENST00000516069 84 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 RNU6-412P-201ENST00000516434 106 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNY4P6-201ENST00000363667 96 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 MIR548D2-201ENST00000384955 97 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNU6-554P-201ENST00000410466 106 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNU7-90P-201ENST00000459216 62 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 RNU7-113P-201ENST00000459273 62 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 AC004812.1-201ENST00000540773 146 ntBASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.57□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.531-201ENST00000384589 121 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 RNA5SP237-201ENST00000410414 113 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 RNU7-62P-201ENST00000458856 62 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 RNU7-21P-201ENST00000459430 62 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 RPS23P4-201ENST00000487908 423 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 MIR3163-201ENST00000581592 73 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 MIR4264-201ENST00000583520 66 ntBASIC1.56□□□□□ -2.16
SYNPOQ8N3V7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 MIR450A1-201ENST00000362262 91 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 SNORA63.5-201ENST00000363548 123 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.323-201ENST00000365157 109 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 AC244023.1-201ENST00000426884 112 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 AC242498.1-201ENST00000604134 111 ntBASIC1.55□□□□□ -2.16
SYNPOQ8N3V7 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 MIR759-201ENST00000390224 91 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 RNU6-613P-201ENST00000410412 108 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 RNU6-994P-201ENST00000410507 111 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 RNU6-94P-201ENST00000607728 107 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 AC087741.2-201ENST00000619415 172 ntBASIC1.54□□□□□ -2.16
SYNPOQ8N3V7 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.163-201ENST00000363702 113 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 SNORD115-20-201ENST00000365099 82 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 RNU6-1014P-201ENST00000383940 103 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 MIR588-201ENST00000384900 83 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 AL031737.1-201ENST00000450125 223 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 snoU13.18-201ENST00000459483 104 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 RPL39P34-201ENST00000477141 156 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 RNA5SP33-201ENST00000516687 98 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.53□□□□□ -2.16
SYNPOQ8N3V7 Y_RNA.49-201ENST00000362714 112 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 SNORD113.3-201ENST00000364630 78 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 U8.6-201ENST00000364939 135 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 MT-TN-201ENST00000387400 73 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 RNA5SP89-201ENST00000410300 108 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 RPL39P25-201ENST00000449384 154 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 RNU1-123P-201ENST00000458950 160 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 RNU7-6P-201ENST00000516845 62 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 AL353770.2-201ENST00000620024 78 ntBASIC1.52□□□□□ -2.17
SYNPOQ8N3V7 SNORD115-19-201ENST00000363098 82 ntBASIC1.51□□□□□ -2.17
SYNPOQ8N3V7 SNORD115-18-201ENST00000363293 82 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms