Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR588-201ENST00000384900 83 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNU6-910P-201ENST00000390844 107 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNA5SP95-201ENST00000410319 137 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 snoU13.2-201ENST00000459201 104 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 AC087741.2-201ENST00000619415 172 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 MIR548D2-201ENST00000384955 97 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SNORA75.2-201ENST00000391138 150 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SNORA75.3-201ENST00000391231 150 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNA5SP237-201ENST00000410414 113 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU7-79P-201ENST00000516082 62 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SEPT14P17-201ENST00000617978 177 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA63.5-201ENST00000363548 123 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-215P-201ENST00000365169 102 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-880P-201ENST00000384526 107 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR1270-201ENST00000459320 83 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU7-35P-201ENST00000517174 62 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR4679-2-201ENST00000578358 77 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6-589P-201ENST00000516485 107 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AL589743.1-201ENST00000551932 2712 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU6-616P-201ENST00000384353 107 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU6-919P-201ENST00000516731 104 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.709-201ENST00000516952 92 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AC141846.1-201ENST00000568348 142 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AL035470.1-201ENST00000622571 220 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CLIP4Q8N3C7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MIR377-201ENST00000362145 69 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-19-201ENST00000363098 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-18-201ENST00000363293 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-17-201ENST00000364612 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-580P-201ENST00000365159 107 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 AL035461.1-201ENST00000421490 332 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RPL39P34-201ENST00000477141 156 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-412P-201ENST00000516434 106 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORD113.3-201ENST00000364630 78 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNU6-44P-201ENST00000384045 107 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNY4P18-201ENST00000391107 89 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORD67.1-201ENST00000516618 108 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC023827.1-201ENST00000569247 97 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 MIR1255B1-201ENST00000636325 63 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 MIR30D-201ENST00000362283 70 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 267.3 ms