Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.558-201ENST00000384685 113 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 SNORA67.5-201ENST00000391036 107 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 RPL31P63-201ENST00000422565 375 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 AC009474.2-201ENST00000451383 136 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 RNU7-2P-201ENST00000516096 62 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-1018P-201ENST00000516577 106 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 RNA5SP364-201ENST00000516938 78 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 MIR4255-201ENST00000579351 72 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 MALAT1.1-201ENST00000618249 95 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 MIR8063-201ENST00000621930 81 ntBASIC2.24□□□□□ -2.05
PRPF40BQ6NWY9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 Y_RNA.224-201ENST00000364308 111 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 SNORD41-201ENST00000386967 70 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 SUMO2P12-201ENST00000405924 140 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 RNA5SP237-201ENST00000410414 113 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-795P-201ENST00000516323 103 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 uc_338.20-201ENST00000621563 178 ntBASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-1201P-201ENST00000384227 107 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 AL353813.1-201ENST00000440700 253 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 RNU6-947P-201ENST00000516264 106 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 SNORA44.1-201ENST00000517031 108 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 RNU7-35P-201ENST00000517174 62 ntBASIC2.22□□□□□ -2.05
PRPF40BQ6NWY9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-170P-201ENST00000362832 104 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 SNORD115-35-201ENST00000365122 82 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 Y_RNA.377-201ENST00000365644 108 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 MIR206-201ENST00000384872 86 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 AC090844.1-201ENST00000422019 156 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 RPL39P39-201ENST00000455840 151 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 RNU7-61P-201ENST00000515897 61 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 AC015688.6-201ENST00000577737 104 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 SNORA77B-201ENST00000578179 125 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 AL442128.1-201ENST00000615151 90 ntBASIC2.21□□□□□ -2.06
PRPF40BQ6NWY9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 Y_RNA.96-201ENST00000363092 109 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 SNORA16.1-201ENST00000364597 132 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-865P-201ENST00000364772 107 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 RNY1P7-201ENST00000384743 110 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 AC004941.2-201ENST00000427009 228 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 HSPE1P24-201ENST00000450782 238 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 RNU7-95P-201ENST00000459222 64 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 RNU7-79P-201ENST00000516082 62 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-1313P-201ENST00000362622 102 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 Y_RNA.342-201ENST00000365352 113 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 MIR1302-4-201ENST00000408701 150 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 AC027119.1-201ENST00000440877 241 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 SNORD67.1-201ENST00000516618 108 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 AC012531.4-201ENST00000616509 177 ntBASIC2.19□□□□□ -2.06
PRPF40BQ6NWY9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 Y_RNA.448-201ENST00000384185 108 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 BX248123.2-201ENST00000606318 124 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 MIR502-201ENST00000606349 86 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 AC103810.8-201ENST00000607347 118 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 AL096861.1-201ENST00000610899 123 ntBASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRPF40BQ6NWY9 SNORD73B-201ENST00000364394 72 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 MRPL35P3-201ENST00000421557 364 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 RPS29P28-201ENST00000446439 141 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 snoU13.9-201ENST00000458927 103 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-844P-201ENST00000517175 102 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 MIR3192-201ENST00000584920 77 ntBASIC2.17□□□□□ -2.06
PRPF40BQ6NWY9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-1134P-201ENST00000365156 101 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 RNU6-644P-201ENST00000391155 98 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 MIR4419B-201ENST00000577260 68 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 AL512598.1-201ENST00000610158 273 ntBASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.16□□□□□ -2.06
PRPF40BQ6NWY9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
PRPF40BQ6NWY9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PRPF40BQ6NWY9 Y_RNA.95-201ENST00000363079 95 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 SNORA25.3-201ENST00000363205 127 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-60P-201ENST00000364792 103 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 AC096949.1-201ENST00000412047 152 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 AC105081.1-201ENST00000617727 106 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 AC091304.10-201ENST00000641554 121 ntBASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PRPF40BQ6NWY9 SNORD114-10-201ENST00000363409 72 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-396P-201ENST00000365369 105 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms