Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
SOX4Q06945 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SOX4Q06945 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
SOX4Q06945 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.23□□□□□ -2.05
SOX4Q06945 RNU6-652P-201ENST00000365488 107 ntBASIC2.23□□□□□ -2.05
SOX4Q06945 SNORD23.1-201ENST00000408212 104 ntBASIC2.23□□□□□ -2.05
SOX4Q06945 Y_RNA.783-201ENST00000613546 102 ntBASIC2.23□□□□□ -2.05
SOX4Q06945 AP001362.1-201ENST00000625165 124 ntBASIC2.23□□□□□ -2.05
SOX4Q06945 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SOX4Q06945 MIR181B2-201ENST00000385004 89 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 MIR764-201ENST00000390811 85 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 RNU6-613P-201ENST00000410412 108 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 RNA5SP237-201ENST00000410414 113 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 Y_RNA.607-201ENST00000410597 98 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 AC009474.2-201ENST00000451383 136 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.22□□□□□ -2.05
SOX4Q06945 AC141846.1-201ENST00000568348 142 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 AL513043.2-201ENST00000573941 143 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX4Q06945 MIR7843-201ENST00000622274 79 ntBASIC2.22□□□□□ -2.05
SOX4Q06945 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SOX4Q06945 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SOX4Q06945 RNU6-24P-201ENST00000384440 107 ntBASIC2.21□□□□□ -2.06
SOX4Q06945 AL161932.1-201ENST00000437408 146 ntBASIC2.21□□□□□ -2.06
SOX4Q06945 AC027119.1-201ENST00000440877 241 ntBASIC2.21□□□□□ -2.06
SOX4Q06945 RNA5SP445-201ENST00000515889 115 ntBASIC2.21□□□□□ -2.06
SOX4Q06945 AC020891.4-201ENST00000605745 93 ntBASIC2.21□□□□□ -2.06
SOX4Q06945 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SOX4Q06945 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX4Q06945 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX4Q06945 RNA5SP259-201ENST00000365541 109 ntBASIC2.2□□□□□ -2.06
SOX4Q06945 RNU6-480P-201ENST00000384332 107 ntBASIC2.2□□□□□ -2.06
SOX4Q06945 MIR504-201ENST00000385065 83 ntBASIC2.2□□□□□ -2.06
SOX4Q06945 AC133485.1-201ENST00000567176 124 ntBASIC2.2□□□□□ -2.06
SOX4Q06945 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
SOX4Q06945 AL662814.1-201ENST00000617364 121 ntBASIC2.2□□□□□ -2.06
SOX4Q06945 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX4Q06945 SNORD115-27-201ENST00000364430 82 ntBASIC2.19□□□□□ -2.06
SOX4Q06945 SNORA2B-201ENST00000384583 137 ntBASIC2.19□□□□□ -2.06
SOX4Q06945 AC244023.1-201ENST00000426884 112 ntBASIC2.19□□□□□ -2.06
SOX4Q06945 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
SOX4Q06945 AC242498.1-201ENST00000604134 111 ntBASIC2.19□□□□□ -2.06
SOX4Q06945 MIR513A1-201ENST00000385138 129 ntBASIC2.18□□□□□ -2.06
SOX4Q06945 AL161935.2-201ENST00000414627 60 ntBASIC2.18□□□□□ -2.06
SOX4Q06945 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
SOX4Q06945 PRELID3BP2-201ENST00000605362 201 ntBASIC2.18□□□□□ -2.06
SOX4Q06945 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
SOX4Q06945 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SOX4Q06945 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
SOX4Q06945 HSBP1P2-201ENST00000299671 229 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 RNA5SP48-201ENST00000363969 126 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 RNU6-949P-201ENST00000384040 107 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 SNORD111.1-201ENST00000516421 86 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
SOX4Q06945 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SOX4Q06945 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SOX4Q06945 RNY1P2-201ENST00000364820 117 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 Y_RNA.316-201ENST00000365118 111 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 RNU6-1296P-201ENST00000383879 107 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 RNU6-524P-201ENST00000384270 107 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 MIR519C-201ENST00000385053 87 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 SNORD41-201ENST00000386967 70 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 U8.13-201ENST00000390842 128 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 JTBP1-201ENST00000441314 247 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 snoU13.2-201ENST00000459201 104 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 AC019288.1-201ENST00000557918 224 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 MIR3192-201ENST00000584920 77 ntBASIC2.16□□□□□ -2.06
SOX4Q06945 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SOX4Q06945 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
SOX4Q06945 RNA5SP432-201ENST00000362480 116 ntBASIC2.15□□□□□ -2.07
SOX4Q06945 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
SOX4Q06945 RNU6-922P-201ENST00000516753 99 ntBASIC2.15□□□□□ -2.07
SOX4Q06945 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.15□□□□□ -2.07
SOX4Q06945 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 Y_RNA.168-201ENST00000363740 102 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 MIR588-201ENST00000384900 83 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 AC093729.1-201ENST00000513074 128 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.14□□□□□ -2.07
SOX4Q06945 MIR4662A-201ENST00000637499 67 ntBASIC2.14□□□□□ -2.07
SOX4Q06945 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SOX4Q06945 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 RNA5SP212-201ENST00000391223 107 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 AC090897.1-201ENST00000580909 226 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 AP000942.3-201ENST00000603702 160 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 AP000753.3-201ENST00000604083 169 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.13□□□□□ -2.07
SOX4Q06945 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SOX4Q06945 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SOX4Q06945 Y_RNA.94-201ENST00000363068 106 ntBASIC2.12□□□□□ -2.07
SOX4Q06945 RNU6-439P-201ENST00000384188 106 ntBASIC2.12□□□□□ -2.07
SOX4Q06945 MIR1302-7-201ENST00000408841 72 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms