Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR548AO-201ENST00000579992 96 ntBASIC2.02□□□□□ -2.09
YBX1P67809 MIR4781-201ENST00000585250 76 ntBASIC2.02□□□□□ -2.09
YBX1P67809 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
YBX1P67809 MIR4251-201ENST00000635819 61 ntBASIC2.02□□□□□ -2.09
YBX1P67809 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
YBX1P67809 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
YBX1P67809 RNU6-979P-201ENST00000383896 107 ntBASIC2.01□□□□□ -2.09
YBX1P67809 SNORD38B-201ENST00000384690 67 ntBASIC2.01□□□□□ -2.09
YBX1P67809 RNU6-1321P-201ENST00000390905 107 ntBASIC2.01□□□□□ -2.09
YBX1P67809 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
YBX1P67809 RNU6-322P-201ENST00000516010 103 ntBASIC2.01□□□□□ -2.09
YBX1P67809 RNU6-90P-201ENST00000606352 106 ntBASIC2.01□□□□□ -2.09
YBX1P67809 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
YBX1P67809 SEPT14P17-201ENST00000617978 177 ntBASIC2.01□□□□□ -2.09
YBX1P67809 SNORD38B-202ENST00000625943 69 ntBASIC2.01□□□□□ -2.09
YBX1P67809 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
YBX1P67809 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
YBX1P67809 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
YBX1P67809 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
YBX1P67809 SNORD114-10-201ENST00000363409 72 ntBASIC2□□□□□ -2.09
YBX1P67809 Y_RNA.567-201ENST00000384736 106 ntBASIC2□□□□□ -2.09
YBX1P67809 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
YBX1P67809 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
YBX1P67809 MIR548G-201ENST00000408442 89 ntBASIC2□□□□□ -2.09
YBX1P67809 RNU7-137P-201ENST00000516788 62 ntBASIC2□□□□□ -2.09
YBX1P67809 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
YBX1P67809 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
YBX1P67809 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
YBX1P67809 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
YBX1P67809 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.191-201ENST00000363972 113 ntBASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.355-201ENST00000365462 98 ntBASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.437-201ENST00000384113 113 ntBASIC1.99□□□□□ -2.09
YBX1P67809 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
YBX1P67809 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
YBX1P67809 RNA5SP237-201ENST00000410414 113 ntBASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.609-201ENST00000410669 89 ntBASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.611-201ENST00000410682 108 ntBASIC1.99□□□□□ -2.09
YBX1P67809 AC004965.1-201ENST00000413033 213 ntBASIC1.99□□□□□ -2.09
YBX1P67809 AC245517.4-201ENST00000448601 281 ntBASIC1.99□□□□□ -2.09
YBX1P67809 RNU7-41P-201ENST00000515917 61 ntBASIC1.99□□□□□ -2.09
YBX1P67809 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.99□□□□□ -2.09
YBX1P67809 Y_RNA.98-201ENST00000363109 102 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-787P-201ENST00000384032 107 ntBASIC1.98□□□□□ -2.09
YBX1P67809 Y_RNA.426-201ENST00000384068 113 ntBASIC1.98□□□□□ -2.09
YBX1P67809 SNORD38.2-201ENST00000384470 69 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-447P-201ENST00000410293 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-1118P-201ENST00000410382 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-1076P-201ENST00000410397 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-355P-201ENST00000410427 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-791P-201ENST00000410467 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-705P-201ENST00000410601 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-1100P-201ENST00000410691 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-860P-201ENST00000410860 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-1217P-201ENST00000411276 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU6-785P-201ENST00000411324 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 AC027119.1-201ENST00000440877 241 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU7-48P-201ENST00000458875 63 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU1-98P-201ENST00000458992 160 ntBASIC1.98□□□□□ -2.09
YBX1P67809 RNU7-171P-201ENST00000459581 62 ntBASIC1.98□□□□□ -2.09
YBX1P67809 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
YBX1P67809 MTND5P40-201ENST00000559945 246 ntBASIC1.98□□□□□ -2.09
YBX1P67809 U6.90-201ENST00000614007 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
YBX1P67809 U6.70-201ENST00000620287 104 ntBASIC1.98□□□□□ -2.09
YBX1P67809 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
YBX1P67809 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
YBX1P67809 Y_RNA.313-201ENST00000365095 103 ntBASIC1.97□□□□□ -2.09
YBX1P67809 RNA5SP259-201ENST00000365541 109 ntBASIC1.97□□□□□ -2.09
YBX1P67809 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
YBX1P67809 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.97□□□□□ -2.09
YBX1P67809 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
YBX1P67809 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
YBX1P67809 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
YBX1P67809 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
YBX1P67809 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
YBX1P67809 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
YBX1P67809 RNU6-1244P-201ENST00000363614 108 ntBASIC1.96□□□□□ -2.1
YBX1P67809 RNY1P13-201ENST00000365030 105 ntBASIC1.96□□□□□ -2.1
YBX1P67809 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
YBX1P67809 AC009474.2-201ENST00000451383 136 ntBASIC1.96□□□□□ -2.1
YBX1P67809 RNU6-295P-201ENST00000516901 104 ntBASIC1.96□□□□□ -2.1
YBX1P67809 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
YBX1P67809 MIR4666B-201ENST00000578142 81 ntBASIC1.96□□□□□ -2.1
YBX1P67809 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
YBX1P67809 AC012676.2-201ENST00000619258 186 ntBASIC1.96□□□□□ -2.1
YBX1P67809 AC025521.1-201ENST00000621624 286 ntBASIC1.96□□□□□ -2.1
YBX1P67809 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
YBX1P67809 RNU6-1125P-201ENST00000363601 107 ntBASIC1.95□□□□□ -2.1
YBX1P67809 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
YBX1P67809 MIR194-1-201ENST00000384892 85 ntBASIC1.95□□□□□ -2.1
YBX1P67809 RNA5SP395-201ENST00000516567 118 ntBASIC1.95□□□□□ -2.1
YBX1P67809 AC141846.1-201ENST00000568348 142 ntBASIC1.95□□□□□ -2.1
YBX1P67809 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
YBX1P67809 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.95□□□□□ -2.1
YBX1P67809 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.95□□□□□ -2.1
YBX1P67809 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
YBX1P67809 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
YBX1P67809 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
YBX1P67809 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms