Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU6-162P-201ENST00000516228 103 ntBASIC2.07□□□□□ -2.08
RTP1P59025 RN7SKP12-201ENST00000516275 143 ntBASIC2.07□□□□□ -2.08
RTP1P59025 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
RTP1P59025 U7.3-201ENST00000616123 62 ntBASIC2.07□□□□□ -2.08
RTP1P59025 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
RTP1P59025 Y_RNA.95-201ENST00000363079 95 ntBASIC2.06□□□□□ -2.08
RTP1P59025 RNA5SP173-201ENST00000364857 136 ntBASIC2.06□□□□□ -2.08
RTP1P59025 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
RTP1P59025 AC090844.1-201ENST00000422019 156 ntBASIC2.06□□□□□ -2.08
RTP1P59025 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
RTP1P59025 UBL5P1-201ENST00000507979 193 ntBASIC2.06□□□□□ -2.08
RTP1P59025 Y_RNA.659-201ENST00000515994 113 ntBASIC2.06□□□□□ -2.08
RTP1P59025 RNU7-2P-201ENST00000516096 62 ntBASIC2.06□□□□□ -2.08
RTP1P59025 RNU7-35P-201ENST00000517174 62 ntBASIC2.06□□□□□ -2.08
RTP1P59025 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
RTP1P59025 MIR548AO-201ENST00000579992 96 ntBASIC2.06□□□□□ -2.08
RTP1P59025 BX248123.2-201ENST00000606318 124 ntBASIC2.06□□□□□ -2.08
RTP1P59025 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.06□□□□□ -2.08
RTP1P59025 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
RTP1P59025 Y_RNA.354-201ENST00000365448 111 ntBASIC2.05□□□□□ -2.08
RTP1P59025 RNU6-820P-201ENST00000384273 107 ntBASIC2.05□□□□□ -2.08
RTP1P59025 RNU6-1307P-201ENST00000391012 103 ntBASIC2.05□□□□□ -2.08
RTP1P59025 SNORA67.5-201ENST00000391036 107 ntBASIC2.05□□□□□ -2.08
RTP1P59025 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
RTP1P59025 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
RTP1P59025 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
RTP1P59025 Y_RNA.247-201ENST00000364500 92 ntBASIC2.04□□□□□ -2.08
RTP1P59025 Y_RNA.467-201ENST00000384297 102 ntBASIC2.04□□□□□ -2.08
RTP1P59025 MIR206-201ENST00000384872 86 ntBASIC2.04□□□□□ -2.08
RTP1P59025 Y_RNA.593-201ENST00000410292 98 ntBASIC2.04□□□□□ -2.08
RTP1P59025 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
RTP1P59025 MRPL35P3-201ENST00000421557 364 ntBASIC2.04□□□□□ -2.08
RTP1P59025 snoU13.18-201ENST00000459483 104 ntBASIC2.04□□□□□ -2.08
RTP1P59025 RNU7-41P-201ENST00000515917 61 ntBASIC2.04□□□□□ -2.08
RTP1P59025 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.04□□□□□ -2.08
RTP1P59025 MIR4251-201ENST00000635819 61 ntBASIC2.04□□□□□ -2.08
RTP1P59025 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
RTP1P59025 MIR494-201ENST00000349529 81 ntBASIC2.03□□□□□ -2.08
RTP1P59025 Y_RNA.17-201ENST00000362433 111 ntBASIC2.03□□□□□ -2.08
RTP1P59025 Y_RNA.224-201ENST00000364308 111 ntBASIC2.03□□□□□ -2.08
RTP1P59025 RNU6-573P-201ENST00000383938 106 ntBASIC2.03□□□□□ -2.08
RTP1P59025 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
RTP1P59025 RNU6-592P-201ENST00000411333 103 ntBASIC2.03□□□□□ -2.08
RTP1P59025 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
RTP1P59025 RNU6-1006P-201ENST00000516998 103 ntBASIC2.03□□□□□ -2.08
RTP1P59025 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
RTP1P59025 CYP3A52P-201ENST00000563326 91 ntBASIC2.03□□□□□ -2.08
RTP1P59025 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
RTP1P59025 AC096720.1-201ENST00000604441 183 ntBASIC2.03□□□□□ -2.08
RTP1P59025 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTP1P59025 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
RTP1P59025 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
RTP1P59025 RNU6-1086P-201ENST00000410930 100 ntBASIC2.02□□□□□ -2.09
RTP1P59025 RNU7-95P-201ENST00000459222 64 ntBASIC2.02□□□□□ -2.09
RTP1P59025 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
RTP1P59025 RNU7-79P-201ENST00000516082 62 ntBASIC2.02□□□□□ -2.09
RTP1P59025 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
RTP1P59025 MIR376B-201ENST00000614515 100 ntBASIC2.02□□□□□ -2.09
RTP1P59025 Y_RNA.190-201ENST00000363964 101 ntBASIC2.01□□□□□ -2.09
RTP1P59025 RNA5SP259-201ENST00000365541 109 ntBASIC2.01□□□□□ -2.09
RTP1P59025 RNU6-1152P-201ENST00000384576 107 ntBASIC2.01□□□□□ -2.09
RTP1P59025 MIR513A1-201ENST00000385138 129 ntBASIC2.01□□□□□ -2.09
RTP1P59025 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
RTP1P59025 AL451046.2-201ENST00000403074 277 ntBASIC2.01□□□□□ -2.09
RTP1P59025 RPL31P63-201ENST00000422565 375 ntBASIC2.01□□□□□ -2.09
RTP1P59025 JTBP1-201ENST00000441314 247 ntBASIC2.01□□□□□ -2.09
RTP1P59025 AC109327.2-201ENST00000448339 378 ntBASIC2.01□□□□□ -2.09
RTP1P59025 SNORD67.1-201ENST00000516618 108 ntBASIC2.01□□□□□ -2.09
RTP1P59025 Y_RNA.705-201ENST00000516862 110 ntBASIC2.01□□□□□ -2.09
RTP1P59025 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.01□□□□□ -2.09
RTP1P59025 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.01□□□□□ -2.09
RTP1P59025 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RTP1P59025 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
RTP1P59025 Y_RNA.96-201ENST00000363092 109 ntBASIC2□□□□□ -2.09
RTP1P59025 RNU6-887P-201ENST00000410660 100 ntBASIC2□□□□□ -2.09
RTP1P59025 AC009474.2-201ENST00000451383 136 ntBASIC2□□□□□ -2.09
RTP1P59025 MIR4287-201ENST00000579398 78 ntBASIC2□□□□□ -2.09
RTP1P59025 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
RTP1P59025 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
RTP1P59025 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2□□□□□ -2.09
RTP1P59025 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
RTP1P59025 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RTP1P59025 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
RTP1P59025 SNORD38B-201ENST00000384690 67 ntBASIC1.99□□□□□ -2.09
RTP1P59025 RNU6-1237P-201ENST00000384777 107 ntBASIC1.99□□□□□ -2.09
RTP1P59025 MIR34C-201ENST00000384831 77 ntBASIC1.99□□□□□ -2.09
RTP1P59025 SNORD41-201ENST00000386967 70 ntBASIC1.99□□□□□ -2.09
RTP1P59025 RNU6-972P-201ENST00000391208 107 ntBASIC1.99□□□□□ -2.09
RTP1P59025 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.99□□□□□ -2.09
RTP1P59025 MIR4439-201ENST00000583746 80 ntBASIC1.99□□□□□ -2.09
RTP1P59025 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
RTP1P59025 MIR502-201ENST00000606349 86 ntBASIC1.99□□□□□ -2.09
RTP1P59025 AL512598.1-201ENST00000610158 273 ntBASIC1.99□□□□□ -2.09
RTP1P59025 SNORD38B-202ENST00000625943 69 ntBASIC1.99□□□□□ -2.09
RTP1P59025 MIR1245B-201ENST00000636115 69 ntBASIC1.99□□□□□ -2.09
RTP1P59025 Y_RNA.448-201ENST00000384185 108 ntBASIC1.98□□□□□ -2.09
RTP1P59025 RNU6-1321P-201ENST00000390905 107 ntBASIC1.98□□□□□ -2.09
RTP1P59025 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
RTP1P59025 RNU6-922P-201ENST00000516753 99 ntBASIC1.98□□□□□ -2.09
RTP1P59025 RNU7-137P-201ENST00000516788 62 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms