Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-1165P-201ENST00000410119 107 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 AC108210.2-201ENST00000503681 201 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 SEPT14P17-201ENST00000617978 177 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.66□□□□□ -2.14
GFRA1P56159 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
GFRA1P56159 Y_RNA.78-201ENST00000362970 110 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 RNU4-36P-201ENST00000364294 144 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 Y_RNA.360-201ENST00000365512 102 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 RNU6-1018P-201ENST00000516577 106 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 RNU7-137P-201ENST00000516788 62 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 MIR4694-201ENST00000578534 80 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 AL512310.12-203ENST00000640543 90 ntBASIC1.66□□□□□ -2.14
GFRA1P56159 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-949P-201ENST00000384040 107 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 Y_RNA.495-201ENST00000384435 112 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 MIR605-201ENST00000385078 83 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-447P-201ENST00000410293 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-1118P-201ENST00000410382 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-1076P-201ENST00000410397 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-355P-201ENST00000410427 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-791P-201ENST00000410467 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-705P-201ENST00000410601 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-1100P-201ENST00000410691 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU2-40P-201ENST00000410833 196 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-860P-201ENST00000410860 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-1217P-201ENST00000411276 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-785P-201ENST00000411324 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 U6.90-201ENST00000614007 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 U6.70-201ENST00000620287 104 ntBASIC1.65□□□□□ -2.15
GFRA1P56159 Y_RNA.10-201ENST00000362371 110 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNY3P2-201ENST00000362918 102 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNU6-865P-201ENST00000364772 107 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 MT-TF-201ENST00000387314 71 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNU6-679P-201ENST00000391003 106 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNA5SP95-201ENST00000410319 137 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 RNU6-168P-201ENST00000516189 101 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 DEFB131E-201ENST00000532329 154 ntBASIC1.64□□□□□ -2.15
GFRA1P56159 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.64□□□□□ -2.15
GFRA1P56159 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
GFRA1P56159 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
GFRA1P56159 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
GFRA1P56159 Y_RNA.168-201ENST00000363740 102 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 Y_RNA.448-201ENST00000384185 108 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 Y_RNA.544-201ENST00000384650 113 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 AC133485.1-201ENST00000567176 124 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 AC105081.1-201ENST00000617727 106 ntBASIC1.63□□□□□ -2.15
GFRA1P56159 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
GFRA1P56159 RNA5SP432-201ENST00000362480 116 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 RNU6-1313P-201ENST00000362622 102 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 RNU6-580P-201ENST00000365159 107 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 MIR577-201ENST00000385196 96 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 AL591704.2-201ENST00000421658 181 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 RNU6-904P-201ENST00000516206 101 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
GFRA1P56159 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
GFRA1P56159 MIR30D-201ENST00000362283 70 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 RNU6-832P-201ENST00000363319 107 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 RNU6-1099P-201ENST00000363533 107 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 MIR590-201ENST00000385008 97 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 SNORA75.2-201ENST00000391138 150 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 SNORA75.3-201ENST00000391231 150 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 SUMO2P12-201ENST00000405924 140 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 RNA5SP89-201ENST00000410300 108 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 SNORA19.1-201ENST00000410656 129 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 AL353813.1-201ENST00000440700 253 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 RNU7-48P-201ENST00000458875 63 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 RNU6-237P-201ENST00000515985 71 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 Y_RNA.818-201ENST00000618813 71 ntBASIC1.61□□□□□ -2.15
GFRA1P56159 Y_RNA.98-201ENST00000363109 102 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 Y_RNA.377-201ENST00000365644 108 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 RNU6-1201P-201ENST00000384227 107 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 RNU6-910P-201ENST00000390844 107 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 RNU6-1321P-201ENST00000390905 107 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 MIR18B-201ENST00000454574 71 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 AC108729.3-201ENST00000513484 108 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 RNU6-537P-201ENST00000517277 103 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 AC096720.1-201ENST00000604441 183 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 AC012676.2-201ENST00000619258 186 ntBASIC1.6□□□□□ -2.15
GFRA1P56159 SNORD113.3-201ENST00000364630 78 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms