Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-24P-201ENST00000384440 107 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 MIR548G-201ENST00000408442 89 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-447P-201ENST00000410293 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-1118P-201ENST00000410382 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-1076P-201ENST00000410397 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-355P-201ENST00000410427 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-791P-201ENST00000410467 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-705P-201ENST00000410601 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 Y_RNA.611-201ENST00000410682 108 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-1100P-201ENST00000410691 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-860P-201ENST00000410860 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-1217P-201ENST00000411276 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU6-785P-201ENST00000411324 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU7-79P-201ENST00000516082 62 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 RNU7-137P-201ENST00000516788 62 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.05□□□□□ -2.08
EPHB3P54753 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 U6.90-201ENST00000614007 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 U6.70-201ENST00000620287 104 ntBASIC2.05□□□□□ -2.08
EPHB3P54753 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
EPHB3P54753 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
EPHB3P54753 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
EPHB3P54753 RNU6-865P-201ENST00000364772 107 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 Y_RNA.567-201ENST00000384736 106 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 RNU6-1321P-201ENST00000390905 107 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.04□□□□□ -2.08
EPHB3P54753 AC019288.1-201ENST00000557918 224 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 MIR4764-201ENST00000580680 88 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
EPHB3P54753 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
EPHB3P54753 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
EPHB3P54753 RNU6-1123P-201ENST00000362347 106 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 Y_RNA.191-201ENST00000363972 113 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 Y_RNA.607-201ENST00000410597 98 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 Y_RNA.609-201ENST00000410669 89 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.03□□□□□ -2.08
EPHB3P54753 RNU6-917P-201ENST00000516294 104 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
EPHB3P54753 CYP3A52P-201ENST00000563326 91 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
EPHB3P54753 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EPHB3P54753 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 Y_RNA.173-201ENST00000363776 113 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RNU7-48P-201ENST00000458875 63 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 RNU6-90P-201ENST00000606352 106 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.02□□□□□ -2.09
EPHB3P54753 SNORD38.2-201ENST00000384470 69 ntBASIC2.01□□□□□ -2.09
EPHB3P54753 RNU6-360P-201ENST00000390944 104 ntBASIC2.01□□□□□ -2.09
EPHB3P54753 AL161932.1-201ENST00000437408 146 ntBASIC2.01□□□□□ -2.09
EPHB3P54753 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.01□□□□□ -2.09
EPHB3P54753 MIR548AO-201ENST00000579992 96 ntBASIC2.01□□□□□ -2.09
EPHB3P54753 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
EPHB3P54753 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
EPHB3P54753 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EPHB3P54753 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
EPHB3P54753 Y_RNA.98-201ENST00000363109 102 ntBASIC2□□□□□ -2.09
EPHB3P54753 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
EPHB3P54753 MIR520C-201ENST00000385005 87 ntBASIC2□□□□□ -2.09
EPHB3P54753 MIR653-201ENST00000385279 96 ntBASIC2□□□□□ -2.09
EPHB3P54753 RNU6-613P-201ENST00000410412 108 ntBASIC2□□□□□ -2.09
EPHB3P54753 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
EPHB3P54753 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2□□□□□ -2.09
EPHB3P54753 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
EPHB3P54753 AP001362.1-201ENST00000625165 124 ntBASIC2□□□□□ -2.09
EPHB3P54753 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 RNY1P13-201ENST00000365030 105 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.99□□□□□ -2.09
EPHB3P54753 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 AC105081.1-201ENST00000617727 106 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 MIR4251-201ENST00000635819 61 ntBASIC1.99□□□□□ -2.09
EPHB3P54753 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
EPHB3P54753 HSBP1P2-201ENST00000299671 229 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 SNORD115-27-201ENST00000364430 82 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 Y_RNA.316-201ENST00000365118 111 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 RNU6-652P-201ENST00000365488 107 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 MIR194-1-201ENST00000384892 85 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 SPINT5P-201ENST00000448174 155 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 RNU1-98P-201ENST00000458992 160 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 AL513043.2-201ENST00000573941 143 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 AC020891.4-201ENST00000605745 93 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 AC012676.2-201ENST00000619258 186 ntBASIC1.98□□□□□ -2.09
EPHB3P54753 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms