Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 Y_RNA.353-201ENST00000365440 108 ntBASIC1.43□□□□□ -2.18
NEK4P51957 SNORA32-201ENST00000384072 121 ntBASIC1.43□□□□□ -2.18
NEK4P51957 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.43□□□□□ -2.18
NEK4P51957 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
NEK4P51957 MIR18B-201ENST00000454574 71 ntBASIC1.43□□□□□ -2.18
NEK4P51957 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
NEK4P51957 RNU7-79P-201ENST00000516082 62 ntBASIC1.43□□□□□ -2.18
NEK4P51957 MIR3163-201ENST00000581592 73 ntBASIC1.43□□□□□ -2.18
NEK4P51957 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
NEK4P51957 MT-TF-201ENST00000387314 71 ntBASIC1.42□□□□□ -2.18
NEK4P51957 MIR548I2-201ENST00000408348 149 ntBASIC1.42□□□□□ -2.18
NEK4P51957 RNU6-735P-201ENST00000410612 107 ntBASIC1.42□□□□□ -2.18
NEK4P51957 snoU13.21-201ENST00000459368 105 ntBASIC1.41□□□□□ -2.18
NEK4P51957 SNORD33.1-201ENST00000516213 88 ntBASIC1.41□□□□□ -2.18
NEK4P51957 RNU7-6P-201ENST00000516845 62 ntBASIC1.41□□□□□ -2.18
NEK4P51957 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
NEK4P51957 AC087741.2-201ENST00000619415 172 ntBASIC1.41□□□□□ -2.18
NEK4P51957 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
NEK4P51957 RNY1P13-201ENST00000365030 105 ntBASIC1.4□□□□□ -2.19
NEK4P51957 RNU6-1081P-201ENST00000384537 107 ntBASIC1.4□□□□□ -2.19
NEK4P51957 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
NEK4P51957 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
NEK4P51957 RNA5SP404-201ENST00000517118 132 ntBASIC1.4□□□□□ -2.19
NEK4P51957 AL359881.1-201ENST00000602916 267 ntBASIC1.4□□□□□ -2.19
NEK4P51957 RNU6-94P-201ENST00000607728 107 ntBASIC1.4□□□□□ -2.19
NEK4P51957 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NEK4P51957 RNY4P6-201ENST00000363667 96 ntBASIC1.39□□□□□ -2.19
NEK4P51957 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
NEK4P51957 RNU6-949P-201ENST00000384040 107 ntBASIC1.39□□□□□ -2.19
NEK4P51957 SNORD77B-201ENST00000391112 67 ntBASIC1.39□□□□□ -2.19
NEK4P51957 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.39□□□□□ -2.19
NEK4P51957 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.39□□□□□ -2.19
NEK4P51957 Y_RNA.649-201ENST00000459077 103 ntBASIC1.39□□□□□ -2.19
NEK4P51957 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
NEK4P51957 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NEK4P51957 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
NEK4P51957 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NEK4P51957 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
NEK4P51957 RNU6-934P-201ENST00000365154 107 ntBASIC1.38□□□□□ -2.19
NEK4P51957 MIR618-201ENST00000385287 98 ntBASIC1.38□□□□□ -2.19
NEK4P51957 AL670379.3-201ENST00000605040 251 ntBASIC1.38□□□□□ -2.19
NEK4P51957 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
NEK4P51957 SNORD115-19-201ENST00000363098 82 ntBASIC1.37□□□□□ -2.19
NEK4P51957 SNORD115-18-201ENST00000363293 82 ntBASIC1.37□□□□□ -2.19
NEK4P51957 SNORD115-17-201ENST00000364612 82 ntBASIC1.37□□□□□ -2.19
NEK4P51957 MIR548D2-201ENST00000384955 97 ntBASIC1.37□□□□□ -2.19
NEK4P51957 MIR548A3-201ENST00000385297 97 ntBASIC1.37□□□□□ -2.19
NEK4P51957 SNORD83.1-201ENST00000411362 77 ntBASIC1.37□□□□□ -2.19
NEK4P51957 AC108729.3-201ENST00000513484 108 ntBASIC1.37□□□□□ -2.19
NEK4P51957 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NEK4P51957 Y_RNA.291-201ENST00000364886 113 ntBASIC1.36□□□□□ -2.19
NEK4P51957 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
NEK4P51957 RNU6-994P-201ENST00000410507 111 ntBASIC1.36□□□□□ -2.19
NEK4P51957 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.36□□□□□ -2.19
NEK4P51957 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.36□□□□□ -2.19
NEK4P51957 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
NEK4P51957 RNU6-834P-201ENST00000362367 110 ntBASIC1.35□□□□□ -2.19
NEK4P51957 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
NEK4P51957 U8.15-201ENST00000390947 134 ntBASIC1.35□□□□□ -2.19
NEK4P51957 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
NEK4P51957 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
NEK4P51957 SNORD67.1-201ENST00000516618 108 ntBASIC1.35□□□□□ -2.19
NEK4P51957 MIR4679-2-201ENST00000578358 77 ntBASIC1.35□□□□□ -2.19
NEK4P51957 FAM71BP1-201ENST00000604431 523 ntBASIC1.35□□□□□ -2.19
NEK4P51957 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
NEK4P51957 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.35□□□□□ -2.19
NEK4P51957 SNORD114-10-201ENST00000363409 72 ntBASIC1.34□□□□□ -2.19
NEK4P51957 RNU6-616P-201ENST00000384353 107 ntBASIC1.34□□□□□ -2.19
NEK4P51957 MIR200A-201ENST00000384875 90 ntBASIC1.34□□□□□ -2.19
NEK4P51957 MIR548A1-201ENST00000385041 97 ntBASIC1.34□□□□□ -2.19
NEK4P51957 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
NEK4P51957 RNU7-137P-201ENST00000516788 62 ntBASIC1.34□□□□□ -2.19
NEK4P51957 AC007012.1-201ENST00000567192 175 ntBASIC1.34□□□□□ -2.19
NEK4P51957 MIR548AI-201ENST00000579940 88 ntBASIC1.34□□□□□ -2.19
NEK4P51957 Y_RNA.773-201ENST00000607168 90 ntBASIC1.34□□□□□ -2.19
NEK4P51957 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NEK4P51957 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
NEK4P51957 Y_RNA.344-201ENST00000365381 112 ntBASIC1.33□□□□□ -2.2
NEK4P51957 RNU6-1144P-201ENST00000384247 104 ntBASIC1.33□□□□□ -2.2
NEK4P51957 RNU6-1064P-201ENST00000410626 104 ntBASIC1.33□□□□□ -2.2
NEK4P51957 RNU7-185P-201ENST00000459215 60 ntBASIC1.33□□□□□ -2.2
NEK4P51957 SNORD124-201ENST00000459577 104 ntBASIC1.33□□□□□ -2.2
NEK4P51957 MIR4771-2-201ENST00000577758 74 ntBASIC1.33□□□□□ -2.2
NEK4P51957 MIR4771-1-201ENST00000582617 74 ntBASIC1.33□□□□□ -2.2
NEK4P51957 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.33□□□□□ -2.2
NEK4P51957 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
NEK4P51957 Y_RNA.362-201ENST00000365518 110 ntBASIC1.32□□□□□ -2.2
NEK4P51957 RNU6-476P-201ENST00000384726 107 ntBASIC1.32□□□□□ -2.2
NEK4P51957 AC096949.1-201ENST00000412047 152 ntBASIC1.32□□□□□ -2.2
NEK4P51957 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
NEK4P51957 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
NEK4P51957 AC020891.4-201ENST00000605745 93 ntBASIC1.32□□□□□ -2.2
NEK4P51957 snoU13.31-201ENST00000607291 104 ntBASIC1.32□□□□□ -2.2
NEK4P51957 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
NEK4P51957 AL589743.1-201ENST00000551932 2712 ntBASIC1.32□□□□□ -2.2
NEK4P51957 AC023934.1-201ENST00000574529 2389 ntBASIC1.32□□□□□ -2.2
NEK4P51957 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEK4P51957 Y_RNA.273-201ENST00000364703 102 ntBASIC1.31□□□□□ -2.2
NEK4P51957 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
NEK4P51957 MIR1827-201ENST00000408549 66 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms