Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPREP23469 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
PTPREP23469 AL161431.1-201ENST00000618966 4205 ntBASIC3.15□□□□□ -1.91
PTPREP23469 RNA5SP432-201ENST00000362480 116 ntBASIC3.15□□□□□ -1.91
PTPREP23469 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
PTPREP23469 SNORA4-201ENST00000584302 138 ntBASIC3.15□□□□□ -1.91
PTPREP23469 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.15□□□□□ -1.91
PTPREP23469 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPREP23469 SNORA67.4-201ENST00000384688 142 ntBASIC3.14□□□□□ -1.91
PTPREP23469 MIR563-201ENST00000385080 79 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNU6-630P-201ENST00000391258 106 ntBASIC3.14□□□□□ -1.91
PTPREP23469 AC244636.1-201ENST00000421152 228 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNU7-26P-201ENST00000458980 63 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNU1-41P-201ENST00000516161 162 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNU1-48P-201ENST00000516400 162 ntBASIC3.14□□□□□ -1.91
PTPREP23469 RNA5SP148-201ENST00000516527 94 ntBASIC3.14□□□□□ -1.91
PTPREP23469 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPREP23469 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.14□□□□□ -1.91
PTPREP23469 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPREP23469 RNU1-148P-201ENST00000384472 162 ntBASIC3.13□□□□□ -1.91
PTPREP23469 RNA5SP465-201ENST00000391195 109 ntBASIC3.13□□□□□ -1.91
PTPREP23469 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
PTPREP23469 PRELID3BP2-201ENST00000605362 201 ntBASIC3.13□□□□□ -1.91
PTPREP23469 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
PTPREP23469 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPREP23469 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPREP23469 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPREP23469 Y_RNA.371-201ENST00000365591 113 ntBASIC3.12□□□□□ -1.91
PTPREP23469 RNU6-291P-201ENST00000384720 107 ntBASIC3.12□□□□□ -1.91
PTPREP23469 RNU6-141P-201ENST00000410499 105 ntBASIC3.12□□□□□ -1.91
PTPREP23469 AC008413.1-201ENST00000511864 177 ntBASIC3.12□□□□□ -1.91
PTPREP23469 U4.3-201ENST00000621047 82 ntBASIC3.12□□□□□ -1.91
PTPREP23469 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPREP23469 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTPREP23469 Y_RNA.42-201ENST00000362660 108 ntBASIC3.11□□□□□ -1.91
PTPREP23469 RNU6-1051P-201ENST00000365471 102 ntBASIC3.11□□□□□ -1.91
PTPREP23469 MIR887-201ENST00000401258 79 ntBASIC3.11□□□□□ -1.91
PTPREP23469 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPREP23469 RNA5SP137-201ENST00000516833 135 ntBASIC3.11□□□□□ -1.91
PTPREP23469 MIR6740-201ENST00000618268 113 ntBASIC3.11□□□□□ -1.91
PTPREP23469 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPREP23469 MIR30D-201ENST00000362283 70 ntBASIC3.1□□□□□ -1.91
PTPREP23469 RNU6-340P-201ENST00000364005 107 ntBASIC3.1□□□□□ -1.91
PTPREP23469 Y_RNA.207-201ENST00000364142 106 ntBASIC3.1□□□□□ -1.91
PTPREP23469 RNU1-138P-201ENST00000384093 164 ntBASIC3.1□□□□□ -1.91
PTPREP23469 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
PTPREP23469 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
PTPREP23469 RNA5SP501-201ENST00000410990 112 ntBASIC3.1□□□□□ -1.91
PTPREP23469 SNORD63B-201ENST00000411005 70 ntBASIC3.1□□□□□ -1.91
PTPREP23469 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.1□□□□□ -1.91
PTPREP23469 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPREP23469 SNORA25.4-201ENST00000363666 124 ntBASIC3.09□□□□□ -1.91
PTPREP23469 RNU6-895P-201ENST00000384125 103 ntBASIC3.09□□□□□ -1.91
PTPREP23469 MIR518A2-201ENST00000384966 87 ntBASIC3.09□□□□□ -1.91
PTPREP23469 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTPREP23469 RNU6-205P-201ENST00000390858 107 ntBASIC3.09□□□□□ -1.91
PTPREP23469 AC092628.1-201ENST00000436250 252 ntBASIC3.09□□□□□ -1.91
PTPREP23469 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPREP23469 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPREP23469 Y_RNA.443-201ENST00000384135 111 ntBASIC3.08□□□□□ -1.92
PTPREP23469 Z96811.1-201ENST00000445880 108 ntBASIC3.08□□□□□ -1.92
PTPREP23469 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
PTPREP23469 ZNF209P-201ENST00000593450 2304 ntBASIC3.08□□□□□ -1.92
PTPREP23469 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
PTPREP23469 MIR337-201ENST00000362281 93 ntBASIC3.07□□□□□ -1.92
PTPREP23469 RNA5SP48-201ENST00000363969 126 ntBASIC3.07□□□□□ -1.92
PTPREP23469 SNORD45A-201ENST00000384512 84 ntBASIC3.07□□□□□ -1.92
PTPREP23469 RNU6-1194P-201ENST00000516208 104 ntBASIC3.07□□□□□ -1.92
PTPREP23469 RNU6-531P-201ENST00000516694 104 ntBASIC3.07□□□□□ -1.92
PTPREP23469 RNU6-322P-201ENST00000516010 103 ntBASIC3.06□□□□□ -1.92
PTPREP23469 RNA5SP24-201ENST00000516478 95 ntBASIC3.06□□□□□ -1.92
PTPREP23469 SNORA31.15-201ENST00000516771 132 ntBASIC3.06□□□□□ -1.92
PTPREP23469 MIR3675-201ENST00000583661 73 ntBASIC3.06□□□□□ -1.92
PTPREP23469 AP006437.1-201ENST00000641440 3685 ntBASIC3.06□□□□□ -1.92
PTPREP23469 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPREP23469 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPREP23469 RNU6-1123P-201ENST00000362347 106 ntBASIC3.05□□□□□ -1.92
PTPREP23469 MIR653-201ENST00000385279 96 ntBASIC3.05□□□□□ -1.92
PTPREP23469 RNU6-1165P-201ENST00000410119 107 ntBASIC3.05□□□□□ -1.92
PTPREP23469 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.05□□□□□ -1.92
PTPREP23469 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPREP23469 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPREP23469 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPREP23469 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTPREP23469 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
PTPREP23469 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
PTPREP23469 SNORD111.1-201ENST00000516421 86 ntBASIC3.04□□□□□ -1.92
PTPREP23469 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
PTPREP23469 AP000942.3-201ENST00000603702 160 ntBASIC3.04□□□□□ -1.92
PTPREP23469 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.04□□□□□ -1.92
PTPREP23469 RNY4P3-201ENST00000365254 95 ntBASIC3.03□□□□□ -1.92
PTPREP23469 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
PTPREP23469 SNORA25.16-201ENST00000516741 121 ntBASIC3.03□□□□□ -1.92
PTPREP23469 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PTPREP23469 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTPREP23469 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPREP23469 RNU6-681P-201ENST00000364012 104 ntBASIC3.02□□□□□ -1.93
PTPREP23469 Y_RNA.239-201ENST00000364444 113 ntBASIC3.02□□□□□ -1.93
PTPREP23469 RNU6-203P-201ENST00000384038 104 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 251.1 ms