Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-457P-201ENST00000363999 107 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.537-201ENST00000384626 109 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-1321P-201ENST00000390905 107 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 MIR548G-201ENST00000408442 89 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 AC073261.1-201ENST00000429409 121 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-439P-201ENST00000384188 106 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 MIR194-1-201ENST00000384892 85 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 SNORA48.3-201ENST00000391081 134 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6-1086P-201ENST00000410930 100 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 AC004965.1-201ENST00000413033 213 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 RPL23AP6-201ENST00000446637 472 ntBASIC2.77□□□□□ -1.97
CSB-PGBD3P0DP91 AP000648.3-201ENST00000623539 4507 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 SNORA40.18-201ENST00000391200 128 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 RPL31P63-201ENST00000422565 375 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 JTBP1-201ENST00000441314 247 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 RNU7-79P-201ENST00000516082 62 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 FAM106DP-201ENST00000586416 501 ntBASIC2.76□□□□□ -1.97
CSB-PGBD3P0DP91 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6-865P-201ENST00000364772 107 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 DEFA7P-201ENST00000382676 285 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 snoU13.16-201ENST00000459350 104 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 RNU7-137P-201ENST00000516788 62 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 AC121758.2-201ENST00000553271 193 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 AL513043.2-201ENST00000573941 143 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 MIR4713-201ENST00000582691 75 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 MIR4712-201ENST00000583750 82 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6-90P-201ENST00000606352 106 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 AL137847.3-201ENST00000611521 109 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 AC080100.1-201ENST00000624239 5356 ntBASIC2.75□□□□□ -1.97
CSB-PGBD3P0DP91 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6-602P-201ENST00000411155 105 ntBASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 AL161932.1-201ENST00000437408 146 ntBASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 SPINT5P-201ENST00000448174 155 ntBASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 MIR4299-201ENST00000577899 72 ntBASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 Z97988.1-201ENST00000637697 135 ntBASIC2.74□□□□□ -1.97
CSB-PGBD3P0DP91 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CSB-PGBD3P0DP91 Y_RNA.173-201ENST00000363776 113 ntBASIC2.73□□□□□ -1.97
CSB-PGBD3P0DP91 MIR17-201ENST00000385012 84 ntBASIC2.73□□□□□ -1.97
CSB-PGBD3P0DP91 RNA5SP181-201ENST00000410246 98 ntBASIC2.73□□□□□ -1.97
CSB-PGBD3P0DP91 SNORA74.3-201ENST00000517108 154 ntBASIC2.73□□□□□ -1.97
CSB-PGBD3P0DP91 MIR181B2-201ENST00000385004 89 ntBASIC2.72□□□□□ -1.97
CSB-PGBD3P0DP91 AL161935.2-201ENST00000414627 60 ntBASIC2.72□□□□□ -1.97
CSB-PGBD3P0DP91 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
CSB-PGBD3P0DP91 RNU6-917P-201ENST00000516294 104 ntBASIC2.71□□□□□ -1.98
CSB-PGBD3P0DP91 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.71□□□□□ -1.98
CSB-PGBD3P0DP91 AC012676.2-201ENST00000619258 186 ntBASIC2.71□□□□□ -1.98
CSB-PGBD3P0DP91 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CSB-PGBD3P0DP91 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CSB-PGBD3P0DP91 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 SNORD114-10-201ENST00000363409 72 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 RNU6-1229P-201ENST00000364295 107 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 RNA5SP138-201ENST00000365098 114 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 MIR519C-201ENST00000385053 87 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 MIR513A1-201ENST00000385138 129 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 RNU7-48P-201ENST00000458875 63 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 AC093729.1-201ENST00000513074 128 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.7□□□□□ -1.98
CSB-PGBD3P0DP91 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNA5SP259-201ENST00000365541 109 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 SNORA2B-201ENST00000384583 137 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNU6-1067P-201ENST00000384752 107 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNU6-1237P-201ENST00000384777 107 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 AC108667.1-201ENST00000428618 249 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNU6-1053P-201ENST00000515930 101 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNA5SP182-201ENST00000516064 82 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 AC008133.2-201ENST00000624540 351 ntBASIC2.69□□□□□ -1.98
CSB-PGBD3P0DP91 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 Y_RNA.354-201ENST00000365448 111 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 AC140658.3-201ENST00000567603 271 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 MIR548AO-201ENST00000579992 96 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 MIR8074-201ENST00000615081 81 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CSB-PGBD3P0DP91 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 RNY1P13-201ENST00000365030 105 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 RNU7-153P-201ENST00000516455 62 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 MTND5P40-201ENST00000559945 246 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 MIR4498-201ENST00000577599 66 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 MIR4764-201ENST00000580680 88 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 MIR6840-201ENST00000611937 71 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 ZNF355P-201ENST00000427301 3216 ntBASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CSB-PGBD3P0DP91 Y_RNA.98-201ENST00000363109 102 ntBASIC2.66□□□□□ -1.98
CSB-PGBD3P0DP91 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.66□□□□□ -1.98
CSB-PGBD3P0DP91 AC087499.7-201ENST00000441958 109 ntBASIC2.66□□□□□ -1.98
CSB-PGBD3P0DP91 RNU6-322P-201ENST00000516010 103 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms