Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SNORA53-201ENST00000391141 249 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 MIR548F1-201ENST00000408667 84 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 AL022718.1-201ENST00000412004 84 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 AC097635.1-201ENST00000450678 155 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 MIR4473-201ENST00000583731 91 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 AL008718.3-201ENST00000610217 321 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 AL606534.2-204ENST00000635008 178 ntBASIC-1.31□□□□□ -2.62
CCDC172P0C7W6 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 RNU6-455P-201ENST00000384681 107 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 AL731563.1-201ENST00000442202 214 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 SNORD67.1-201ENST00000516618 108 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 AC040926.1-201ENST00000530195 238 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 AC113139.1-201ENST00000605049 239 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 SNORD58B-201ENST00000607313 66 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 snoU18.1-201ENST00000629629 71 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 AC093726.3-201ENST00000637588 150 ntBASIC-1.32□□□□□ -2.62
CCDC172P0C7W6 RNU6-662P-201ENST00000384253 104 ntBASIC-1.33□□□□□ -2.62
CCDC172P0C7W6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
CCDC172P0C7W6 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.33□□□□□ -2.62
CCDC172P0C7W6 SNORD114-10-201ENST00000363409 72 ntBASIC-1.34□□□□□ -2.62
CCDC172P0C7W6 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.34□□□□□ -2.62
CCDC172P0C7W6 MT-TT-201ENST00000387460 66 ntBASIC-1.34□□□□□ -2.62
CCDC172P0C7W6 RNU7-13P-201ENST00000516413 62 ntBASIC-1.34□□□□□ -2.62
CCDC172P0C7W6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
CCDC172P0C7W6 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 SNORD114-29-201ENST00000364819 70 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 SNORD116-2-201ENST00000384274 95 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 SNORD116-6-201ENST00000384711 96 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 AL603914.1-201ENST00000401964 204 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 AC074198.2-201ENST00000508153 258 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 AC026407.1-201ENST00000518369 204 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 MIR376A1-201ENST00000616574 68 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 AC069503.3-201ENST00000618674 145 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 AC104985.2-201ENST00000620598 500 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 MTND4LP32-201ENST00000636111 270 ntBASIC-1.35□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 SNORD81.2-201ENST00000365153 76 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 RNU1-115P-201ENST00000365329 160 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 SNORA32-201ENST00000384072 121 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 Z95118.1-201ENST00000421372 247 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 RNU7-113P-201ENST00000459273 62 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 RNA5SP33-201ENST00000516687 98 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 RNA5SP169-201ENST00000517268 117 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 MIR3681-201ENST00000580089 72 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 AL365205.2-201ENST00000594586 68 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 AL359881.1-201ENST00000602916 267 ntBASIC-1.36□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 MTND4LP30-201ENST00000454092 297 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 RNU6-758P-201ENST00000516292 89 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 RNU6-175P-201ENST00000516896 107 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 MTND5P40-201ENST00000559945 246 ntBASIC-1.37□□□□□ -2.63
CCDC172P0C7W6 SNORD115-2-201ENST00000362842 82 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 SNORD115-20-201ENST00000365099 82 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 SNORD115-46-201ENST00000390982 71 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 RNA5SP144-201ENST00000410846 116 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 YWHAEP2-201ENST00000580066 112 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 AC006504.6-201ENST00000590142 199 ntBASIC-1.38□□□□□ -2.63
CCDC172P0C7W6 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 MT-TQ-201ENST00000387372 72 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 AL606845.1-201ENST00000404881 255 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 SCARNA15-202ENST00000516881 127 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 MIR4500-201ENST00000579472 76 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 AC084782.3-201ENST00000612282 578 ntBASIC-1.39□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 SNORD116-29-201ENST00000384516 83 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 RNY4P36-201ENST00000391116 96 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 SNORA27.4-201ENST00000516650 95 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 AC108676.2-201ENST00000605225 163 ntBASIC-1.4□□□□□ -2.63
CCDC172P0C7W6 SNORA25.1-201ENST00000362326 128 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 MIR539-201ENST00000365690 78 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 MIR9-2-201ENST00000384838 87 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 MIR204-201ENST00000385200 110 ntBASIC-1.41□□□□□ -2.64
CCDC172P0C7W6 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 MIR519A1-201ENST00000385257 85 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 AC093423.1-201ENST00000440817 142 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 RNU6-570P-201ENST00000517051 105 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 AP001328.1-201ENST00000528550 176 ntBASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.42□□□□□ -2.64
CCDC172P0C7W6 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.43□□□□□ -2.64
CCDC172P0C7W6 RNU6-290P-201ENST00000365212 101 ntBASIC-1.43□□□□□ -2.64
CCDC172P0C7W6 RNU6-326P-201ENST00000365480 107 ntBASIC-1.43□□□□□ -2.64
CCDC172P0C7W6 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.43□□□□□ -2.64
CCDC172P0C7W6 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.43□□□□□ -2.64
CCDC172P0C7W6 MIR548I2-201ENST00000408348 149 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms