Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU6-120P-201ENST00000516077 103 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 AL359881.1-201ENST00000602916 267 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 C8orf59P2-201ENST00000603441 271 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 AC145423.2-201ENST00000610631 239 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 AL669831.3-213ENST00000636676 183 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 RNA5SP192-201ENST00000364404 120 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 RNU6-973P-201ENST00000364690 107 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 AC098614.3-201ENST00000438957 440 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 RNU7-195P-201ENST00000458793 62 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 AC022137.1-201ENST00000483735 151 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 SEPT14P8-201ENST00000508026 178 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 SNORD22.1-201ENST00000516331 125 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 VN1R91P-201ENST00000594377 169 ntBASIC-1.51□□□□□ -2.65
CXCL1P09341 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 RNU6-524P-201ENST00000384270 107 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.52□□□□□ -2.65
CXCL1P09341 AL500527.2-201ENST00000454105 95 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 SNORD113-5-201ENST00000607261 78 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 Z99129.1-201ENST00000612510 255 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 AC133104.2-201ENST00000615272 193 ntBASIC-1.52□□□□□ -2.65
CXCL1P09341 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 RNU6-510P-201ENST00000391239 108 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 SNORD63B-201ENST00000411005 70 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.53□□□□□ -2.65
CXCL1P09341 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.53□□□□□ -2.65
CXCL1P09341 MIR3129-201ENST00000581095 76 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 AL121655.1-201ENST00000605811 308 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 AC007485.1-201ENST00000616755 206 ntBASIC-1.53□□□□□ -2.65
CXCL1P09341 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 RNU6-937P-201ENST00000384325 106 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 MIR517B-201ENST00000385102 67 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 SNORA49-201ENST00000386157 136 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 MTND1P1-201ENST00000445453 368 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 RNU7-113P-201ENST00000459273 62 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 RNA5SP67-201ENST00000516422 131 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 RNA5SP33-201ENST00000516687 98 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 AC007012.1-201ENST00000567192 175 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 MIR4500-201ENST00000579472 76 ntBASIC-1.54□□□□□ -2.66
CXCL1P09341 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 RNA5SP144-201ENST00000410846 116 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 MIR2113-201ENST00000459007 91 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 SNORD2-201ENST00000459163 69 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 RNU6-570P-201ENST00000517051 105 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 AL365205.2-201ENST00000594586 68 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 AC093783.1-201ENST00000612976 329 ntBASIC-1.55□□□□□ -2.66
CXCL1P09341 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 RNU6-170P-201ENST00000362832 104 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 SNORA32-201ENST00000384072 121 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 AC099799.1-201ENST00000439809 192 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 AC145350.1-201ENST00000567426 208 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 MIR3611-201ENST00000584484 83 ntBASIC-1.56□□□□□ -2.66
CXCL1P09341 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 MIR652-201ENST00000385278 98 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
CXCL1P09341 PMCHL1-202ENST00000423102 261 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 AP000533.3-201ENST00000447704 118 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 RNY1P9-201ENST00000532431 109 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 AC140658.3-201ENST00000567603 271 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 MIR4306-201ENST00000583390 91 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.57□□□□□ -2.66
CXCL1P09341 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 RNY4P14-201ENST00000363656 96 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 MIR147A-201ENST00000385079 72 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 MTND3P8-201ENST00000412909 339 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 SNRPGP8-201ENST00000454064 226 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 MRPS35P2-201ENST00000508242 191 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 MIR3115-201ENST00000577915 68 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.58□□□□□ -2.66
CXCL1P09341 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.59□□□□□ -2.66
CXCL1P09341 AC016907.1-201ENST00000419483 435 ntBASIC-1.59□□□□□ -2.66
CXCL1P09341 SCARNA15-202ENST00000516881 127 ntBASIC-1.59□□□□□ -2.66
CXCL1P09341 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.59□□□□□ -2.66
CXCL1P09341 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.6□□□□□ -2.67
CXCL1P09341 SCARNA18B-201ENST00000458806 135 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 838.6 ms