Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
CTSDP07339 RNU6-507P-201ENST00000516045 100 ntBASIC-0.94□□□□□ -2.56
CTSDP07339 AC040926.1-201ENST00000530195 238 ntBASIC-0.94□□□□□ -2.56
CTSDP07339 AC103591.3-201ENST00000608684 209 ntBASIC-0.94□□□□□ -2.56
CTSDP07339 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 RNU4-10P-201ENST00000364383 140 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 MIR539-201ENST00000365690 78 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 RNY3P5-201ENST00000384127 102 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.95□□□□□ -2.56
CTSDP07339 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 SNORD116.3-201ENST00000517176 78 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 MTND5P40-201ENST00000559945 246 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 MIR548AX-201ENST00000580117 73 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.95□□□□□ -2.56
CTSDP07339 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.95□□□□□ -2.56
CTSDP07339 SNORD114-10-201ENST00000363409 72 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 SNORD56B-201ENST00000384713 71 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 SCARNA17-201ENST00000516183 144 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 SNORA40.14-201ENST00000516543 86 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 SNORD67.1-201ENST00000516618 108 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 YWHAEP2-201ENST00000580066 112 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 MIR548AE1-201ENST00000583292 70 ntBASIC-0.96□□□□□ -2.56
CTSDP07339 SNORD113-8-201ENST00000363497 74 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 SNORD114-15-201ENST00000364687 72 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
CTSDP07339 AL731563.1-201ENST00000442202 214 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 SNRPGP8-201ENST00000454064 226 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 RNU6-881P-201ENST00000516813 102 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
CTSDP07339 RNU6-86P-201ENST00000606534 107 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 AC025253.1-201ENST00000613623 543 ntBASIC-0.97□□□□□ -2.56
CTSDP07339 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 MIR519A1-201ENST00000385257 85 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.98□□□□□ -2.57
CTSDP07339 MTND4LP30-201ENST00000454092 297 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 HSPE1P25-201ENST00000455484 251 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 RNU7-113P-201ENST00000459273 62 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 RNA5SP33-201ENST00000516687 98 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 RNU6-570P-201ENST00000517051 105 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 MIR4280-201ENST00000582178 76 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 AL365205.2-201ENST00000594586 68 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 AC002553.4-201ENST00000616896 331 ntBASIC-0.98□□□□□ -2.57
CTSDP07339 RNU4-90P-201ENST00000362773 141 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 SNORD115-2-201ENST00000362842 82 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 SNORD115-20-201ENST00000365099 82 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 RNY4P3-201ENST00000365254 95 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 SNORA32-201ENST00000384072 121 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 RNU6-900P-201ENST00000384498 102 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 RNU6-901P-201ENST00000384593 106 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
CTSDP07339 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 SNORD38.3-201ENST00000516599 73 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 AL359881.1-201ENST00000602916 267 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 AL008718.3-201ENST00000610217 321 ntBASIC-0.99□□□□□ -2.57
CTSDP07339 Y_RNA.166-201ENST00000363730 102 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNU6-1036P-201ENST00000383959 104 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNU6-154P-201ENST00000384306 106 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNU6-102P-201ENST00000384485 104 ntBASIC-1□□□□□ -2.57
CTSDP07339 SNORD83B-201ENST00000386745 93 ntBASIC-1□□□□□ -2.57
CTSDP07339 MIR548I2-201ENST00000408348 149 ntBASIC-1□□□□□ -2.57
CTSDP07339 MIR1277-201ENST00000408536 78 ntBASIC-1□□□□□ -2.57
CTSDP07339 Y_RNA.602-201ENST00000410535 92 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNA5SP144-201ENST00000410846 116 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNU6-130P-201ENST00000411112 103 ntBASIC-1□□□□□ -2.57
CTSDP07339 AC093423.1-201ENST00000440817 142 ntBASIC-1□□□□□ -2.57
CTSDP07339 SNORA13-201ENST00000458790 133 ntBASIC-1□□□□□ -2.57
CTSDP07339 Y_RNA.639-201ENST00000458981 102 ntBASIC-1□□□□□ -2.57
CTSDP07339 Y_RNA.648-201ENST00000459455 110 ntBASIC-1□□□□□ -2.57
CTSDP07339 Y_RNA.809-201ENST00000516058 95 ntBASIC-1□□□□□ -2.57
CTSDP07339 RNU6-358P-201ENST00000516564 75 ntBASIC-1□□□□□ -2.57
CTSDP07339 SNORA20.3-201ENST00000516880 132 ntBASIC-1□□□□□ -2.57
CTSDP07339 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1□□□□□ -2.57
CTSDP07339 MIR4500-201ENST00000579472 76 ntBASIC-1□□□□□ -2.57
CTSDP07339 MIR548AG2-201ENST00000581228 64 ntBASIC-1□□□□□ -2.57
CTSDP07339 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1□□□□□ -2.57
CTSDP07339 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 RNU4-36P-201ENST00000364294 144 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 MIR617-201ENST00000385030 97 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 MIR519E-201ENST00000385075 84 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 RNU6-559P-201ENST00000516151 98 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 PART1_1.1-201ENST00000611761 217 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 MIR376A1-201ENST00000616574 68 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 AL606534.2-204ENST00000635008 178 ntBASIC-1.01□□□□□ -2.57
CTSDP07339 SNORD114-25-201ENST00000363742 72 ntBASIC-1.02□□□□□ -2.57
CTSDP07339 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms