Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 RNU6-83P-201ENST00000384568 112 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MT-TT-201ENST00000387460 66 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 SNORA53-201ENST00000391141 249 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR548H1-201ENST00000408610 102 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 AL021368.1-201ENST00000607490 540 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 RNU6-957P-201ENST00000363652 99 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 SNORD63B-201ENST00000411005 70 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MTND1P34-201ENST00000438556 671 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MTND2P22-201ENST00000444325 1033 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR2113-201ENST00000459007 91 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR5197-201ENST00000583721 112 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 AL158211.2-201ENST00000607282 395 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR1244-1-201ENST00000612829 85 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR1244-3-201ENST00000635744 85 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR1244-2-201ENST00000636449 85 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 MIR1244-4-202ENST00000636813 85 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 AC099654.14-201ENST00000638599 341 ntBASIC-1.31□□□□□ -2.62
SPTA1P02549 RNU4-50P-201ENST00000364361 141 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 RNU6-337P-201ENST00000391243 106 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AC018880.2-201ENST00000414265 201 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 MIR4724-201ENST00000579485 89 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AC090617.8-201ENST00000623339 167 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.32□□□□□ -2.62
SPTA1P02549 SNORD36A-201ENST00000362874 73 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 SNORD115-33-201ENST00000363723 82 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 RNU6-842P-201ENST00000384269 107 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AL590004.1-201ENST00000405321 300 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 MIR2355-201ENST00000517199 87 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AL021707.8-201ENST00000609428 183 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AC084782.3-201ENST00000612282 578 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 AC021613.1-201ENST00000623880 111 ntBASIC-1.32□□□□□ -2.62
SPTA1P02549 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 CCDC34P1-201ENST00000507441 517 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 AC108019.1-201ENST00000512540 175 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 AC060788.1-201ENST00000521318 469 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 AL359881.1-201ENST00000602916 267 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 AC005014.3-201ENST00000605985 190 ntBASIC-1.33□□□□□ -2.62
SPTA1P02549 RNA5SP26-201ENST00000362406 119 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-801P-201ENST00000364087 105 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-243P-201ENST00000391140 107 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 MTCO2P4-201ENST00000517968 247 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 MIR3145-201ENST00000580727 82 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 MIR6841-201ENST00000637129 72 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-626P-201ENST00000363354 107 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-710P-201ENST00000410424 105 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU7-88P-201ENST00000458752 63 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-850P-201ENST00000516934 103 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 AP002795.1-201ENST00000534879 84 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 AC092747.3-201ENST00000603769 301 ntBASIC-1.34□□□□□ -2.62
SPTA1P02549 RNU6-522P-201ENST00000364497 107 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 MIR190B-201ENST00000401119 79 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.35□□□□□ -2.62
SPTA1P02549 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 MIR4662B-201ENST00000579498 81 ntBASIC-1.35□□□□□ -2.62
SPTA1P02549 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.35□□□□□ -2.62
SPTA1P02549 RNU6-874P-201ENST00000362390 105 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 RNU6-99P-201ENST00000364721 107 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 RNU2-31P-201ENST00000516954 155 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 AC006006.1-201ENST00000603082 144 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 AP001506.1-201ENST00000615444 211 ntBASIC-1.35□□□□□ -2.63
SPTA1P02549 RNU6-170P-201ENST00000362832 104 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 MTND4P28-201ENST00000426217 387 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU7-70P-201ENST00000516941 66 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 AP003461.1-201ENST00000528866 78 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 AP000240.1-201ENST00000609910 452 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU6-596P-201ENST00000365395 98 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU6-20P-201ENST00000384106 107 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU6-466P-201ENST00000391224 103 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNA5SP144-201ENST00000410846 116 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 AL353193.1-201ENST00000421444 268 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 RNU6-126P-201ENST00000516685 103 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.36□□□□□ -2.63
SPTA1P02549 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.37□□□□□ -2.63
SPTA1P02549 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.37□□□□□ -2.63
SPTA1P02549 RNA5SP405-201ENST00000363059 114 ntBASIC-1.37□□□□□ -2.63
SPTA1P02549 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.37□□□□□ -2.63
SPTA1P02549 SNORA62.4-201ENST00000365504 151 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms