Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
CSDE1O75534 RNU6-1023P-201ENST00000516137 106 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 SNORD92-201ENST00000585078 85 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 MTND5P32-201ENST00000560711 1802 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 Y_RNA.193-201ENST00000363979 102 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 MIR1273G-201ENST00000577677 100 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 MIR6841-201ENST00000637129 72 ntBASIC0.43□□□□□ -2.34
CSDE1O75534 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CSDE1O75534 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
CSDE1O75534 RNU6-403P-201ENST00000363163 104 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 RNU6-47P-201ENST00000383866 107 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 RNU6-918P-201ENST00000391219 106 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 MRPS18CP4-201ENST00000535821 231 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 MIR3149-201ENST00000584629 83 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
CSDE1O75534 Y_RNA.75-201ENST00000362927 97 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 Y_RNA.200-201ENST00000364018 102 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 RNU6-893P-201ENST00000458841 100 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 AC002350.1-201ENST00000490759 375 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 RNU6-448P-201ENST00000517052 107 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 AC141846.1-201ENST00000568348 142 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 AL353621.2-201ENST00000605340 133 ntBASIC0.41□□□□□ -2.34
CSDE1O75534 MIR411-201ENST00000362239 96 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 Y_RNA.83-201ENST00000363005 113 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 RNU6-1020P-201ENST00000363684 107 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 Y_RNA.452-201ENST00000384202 108 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 SNORA18-201ENST00000384416 132 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 SNORA72.6-201ENST00000384520 129 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 U8.15-201ENST00000390947 134 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 RNU6-1258P-201ENST00000516911 111 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 MIR8066-201ENST00000617280 78 ntBASIC0.4□□□□□ -2.35
CSDE1O75534 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
CSDE1O75534 RNY1P6-201ENST00000384193 109 ntBASIC0.39□□□□□ -2.35
CSDE1O75534 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
CSDE1O75534 AC022559.1-201ENST00000520905 205 ntBASIC0.39□□□□□ -2.35
CSDE1O75534 MIR4431-201ENST00000579990 94 ntBASIC0.39□□□□□ -2.35
CSDE1O75534 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.39□□□□□ -2.35
CSDE1O75534 Y_RNA.42-201ENST00000362660 108 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 Y_RNA.52-201ENST00000362760 96 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 Y_RNA.171-201ENST00000363760 102 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 RNU6-768P-201ENST00000384683 107 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 AC096949.1-201ENST00000412047 152 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 AC107027.2-201ENST00000512197 115 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 SNORA25.12-201ENST00000516202 82 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 RNU6-469P-201ENST00000516253 101 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.38□□□□□ -2.35
CSDE1O75534 uc_338.16-201ENST00000621804 95 ntBASIC0.38□□□□□ -2.35
CSDE1O75534 Y_RNA.13-201ENST00000362403 112 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 RNU6-1082P-201ENST00000364574 107 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 Y_RNA.588-201ENST00000391254 102 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 RNU6-1219P-201ENST00000516143 112 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 AC130289.1-201ENST00000577321 73 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 Y_RNA.757-201ENST00000578934 114 ntBASIC0.37□□□□□ -2.35
CSDE1O75534 Y_RNA.144-201ENST00000363521 113 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 Y_RNA.274-201ENST00000364714 101 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 RNU6-463P-201ENST00000384340 107 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 Y_RNA.489-201ENST00000384410 101 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 RNU5E-9P-201ENST00000411164 104 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 MIR6082-201ENST00000613604 109 ntBASIC0.36□□□□□ -2.35
CSDE1O75534 Y_RNA.435-201ENST00000384095 112 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 AL022718.1-201ENST00000412004 84 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 RNU7-113P-201ENST00000459273 62 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 MIR4491-201ENST00000581087 68 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 SNORA25.18-201ENST00000607153 114 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.35□□□□□ -2.35
CSDE1O75534 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CSDE1O75534 RNU6-818P-201ENST00000364837 108 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 RNY1P13-201ENST00000365030 105 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 RNU6-690P-201ENST00000365242 106 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 Y_RNA.337-201ENST00000365312 102 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 Y_RNA.470-201ENST00000384307 117 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 RNA5SP144-201ENST00000410846 116 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 RNU6-1086P-201ENST00000410930 100 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.34□□□□□ -2.36
CSDE1O75534 RNA5SP236-201ENST00000516169 116 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 AC009779.6-201ENST00000603972 165 ntBASIC0.34□□□□□ -2.36
CSDE1O75534 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CSDE1O75534 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms