Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-205P-201ENST00000390858 107 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 RNU6-1321P-201ENST00000390905 107 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 MIR1185-1-201ENST00000408598 86 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.78□□□□□ -2.12
NPHS1O60500 MIR6740-201ENST00000618268 113 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NPHS1O60500 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NPHS1O60500 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 Y_RNA.342-201ENST00000365352 113 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 RNY1P7-201ENST00000384743 110 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 AC004941.2-201ENST00000427009 228 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 RNU7-61P-201ENST00000515897 61 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 Y_RNA.659-201ENST00000515994 113 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 MIR4298-201ENST00000584380 73 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHS1O60500 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 MALAT1.1-201ENST00000618249 95 ntBASIC1.77□□□□□ -2.13
NPHS1O60500 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNA5SP264-201ENST00000363115 107 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNU6-294P-201ENST00000364999 102 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 SNORA70B-201ENST00000384210 135 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNU6-644P-201ENST00000391155 98 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RN7SL429P-201ENST00000479090 223 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RN7SL489P-201ENST00000486185 223 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RN7SL327P-201ENST00000488659 223 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNU6-1006P-201ENST00000516998 103 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 MIR4264-201ENST00000583520 66 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 MIR4777-201ENST00000583710 86 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 MIR376B-201ENST00000614515 100 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RN7SL853P-201ENST00000617250 223 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.76□□□□□ -2.13
NPHS1O60500 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NPHS1O60500 AL161722.3-201ENST00000605789 2983 ntBASIC1.76□□□□□ -2.13
NPHS1O60500 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 SNORD45B-201ENST00000364617 72 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 RNU6-865P-201ENST00000364772 107 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 MIR563-201ENST00000385080 79 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 RPL30P7-201ENST00000479312 323 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 MIR2115-201ENST00000516657 100 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 AL512310.8-201ENST00000550183 120 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 AP000753.3-201ENST00000604083 169 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 AC096720.1-201ENST00000604441 183 ntBASIC1.75□□□□□ -2.13
NPHS1O60500 Y_RNA.95-201ENST00000363079 95 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 RNA5SP95-201ENST00000410319 137 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 AC096949.1-201ENST00000412047 152 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 uc_338.6-201ENST00000613544 171 ntBASIC1.74□□□□□ -2.13
NPHS1O60500 Y_RNA.220-201ENST00000364244 109 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RNU6-949P-201ENST00000384040 107 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 Y_RNA.467-201ENST00000384297 102 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 MT-TN-201ENST00000387400 73 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 MRPL35P3-201ENST00000421557 364 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RPS27P16-201ENST00000425758 201 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RPS29P28-201ENST00000446439 141 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RNU7-48P-201ENST00000458875 63 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RNU6-162P-201ENST00000516228 103 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 RNU11-2P-201ENST00000516898 142 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.73□□□□□ -2.13
NPHS1O60500 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
NPHS1O60500 MIR30D-201ENST00000362283 70 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 Y_RNA.140-201ENST00000363474 103 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 SNORD38.1-201ENST00000363863 68 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 Y_RNA.290-201ENST00000364879 114 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-1165P-201ENST00000410119 107 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-447P-201ENST00000410293 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-1118P-201ENST00000410382 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-1076P-201ENST00000410397 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-355P-201ENST00000410427 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-791P-201ENST00000410467 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-705P-201ENST00000410601 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-1100P-201ENST00000410691 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-860P-201ENST00000410860 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-1217P-201ENST00000411276 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU6-785P-201ENST00000411324 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 AC109327.2-201ENST00000448339 378 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 RNU7-62P-201ENST00000458856 62 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 U6.90-201ENST00000614007 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 U6.70-201ENST00000620287 104 ntBASIC1.72□□□□□ -2.13
NPHS1O60500 Y_RNA.98-201ENST00000363109 102 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RNU1-78P-201ENST00000391248 165 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RNU6-613P-201ENST00000410412 108 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RNU1-41P-201ENST00000516161 162 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RNU1-48P-201ENST00000516400 162 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 RNU6-844P-201ENST00000517175 102 ntBASIC1.71□□□□□ -2.14
NPHS1O60500 U7.3-201ENST00000616123 62 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms