Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 RNU7-123P-201ENST00000515911 60 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC022523.2-201ENST00000561045 150 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC133485.4-201ENST00000561835 220 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC138907.4-201ENST00000570107 226 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
HDAC3O15379 MIR4264-201ENST00000583520 66 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC021443.1-201ENST00000604478 211 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 U7.2-201ENST00000607576 63 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC011603.4-201ENST00000611325 277 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.72□□□□□ -2.29
HDAC3O15379 MIR377-201ENST00000362145 69 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-704P-201ENST00000364162 103 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 SNORD114-24-201ENST00000365029 72 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-580P-201ENST00000365159 107 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-1104P-201ENST00000384723 104 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-1237P-201ENST00000384777 107 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 MIR588-201ENST00000384900 83 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 MIR613-201ENST00000385248 95 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 MIR1270-201ENST00000459320 83 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-781P-201ENST00000516377 101 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 Y_RNA.692-201ENST00000516627 105 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 MIR4305-201ENST00000583252 102 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 AL137067.1-201ENST00000615933 120 ntBASIC0.71□□□□□ -2.3
HDAC3O15379 RNU6-369P-201ENST00000362515 102 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 Y_RNA.168-201ENST00000363740 102 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 SNORD113.3-201ENST00000364630 78 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU6-1335P-201ENST00000365426 107 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 MT-TI-201ENST00000387365 69 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 AL603908.1-201ENST00000406098 201 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 AL158147.1-201ENST00000443970 75 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU7-107P-201ENST00000459121 61 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU6-1211P-201ENST00000459179 105 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 snoU13.2-201ENST00000459201 104 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU7-164P-201ENST00000459221 62 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNY4P20-201ENST00000516678 93 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 RNU6-1234P-201ENST00000516877 103 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 MIR3152-201ENST00000579801 74 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 AP000753.3-201ENST00000604083 169 ntBASIC0.7□□□□□ -2.3
HDAC3O15379 MIR30D-201ENST00000362283 70 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 Y_RNA.218-201ENST00000364218 104 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 Y_RNA.298-201ENST00000364960 107 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 SNORD50.2-201ENST00000365465 70 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 SNORA18-201ENST00000384416 132 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 RNU6-1165P-201ENST00000410119 107 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
HDAC3O15379 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
HDAC3O15379 Y_RNA.531-201ENST00000384589 121 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 RNA5SP261-201ENST00000410536 106 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 Y_RNA.617-201ENST00000410920 90 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 Y_RNA.630-201ENST00000411370 108 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 AL022718.1-201ENST00000412004 84 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 RNU7-113P-201ENST00000459273 62 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 RN7SKP19-201ENST00000516016 252 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 MIR548AE2-201ENST00000583456 67 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 TUG1_4.1-201ENST00000619464 181 ntBASIC0.68□□□□□ -2.3
HDAC3O15379 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.68□□□□□ -2.3
HDAC3O15379 SNORA32-201ENST00000384072 121 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 SNORD111-201ENST00000408139 94 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 MIR1263-201ENST00000408324 86 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 RNU6-735P-201ENST00000410612 107 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 RNA5SP33-201ENST00000516687 98 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
HDAC3O15379 SNORD115-2-201ENST00000362842 82 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 RNU6-647P-201ENST00000364243 107 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 SNORD115-20-201ENST00000365099 82 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 Y_RNA.354-201ENST00000365448 111 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 MIR200A-201ENST00000384875 90 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 AC096949.1-201ENST00000412047 152 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 PDCD5P2-201ENST00000507570 312 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 RNU6-772P-201ENST00000516042 105 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 AC141846.1-201ENST00000568348 142 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 MIR3910-1-201ENST00000580936 111 ntBASIC0.66□□□□□ -2.3
HDAC3O15379 Y_RNA.71-201ENST00000362892 104 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 RNY1P13-201ENST00000365030 105 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 SNORD58C-201ENST00000365223 64 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 MIRLET7F2-201ENST00000385277 83 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 MIR1827-201ENST00000408549 66 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 RNU6-1061P-201ENST00000516530 99 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 RNU7-35P-201ENST00000517174 62 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 MIR4771-2-201ENST00000577758 74 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 MIR4771-1-201ENST00000582617 74 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 AL359881.1-201ENST00000602916 267 ntBASIC0.65□□□□□ -2.31
HDAC3O15379 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 357 ms