Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR4460-201ENST00000577862 86 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 AL359881.1-201ENST00000602916 267 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 MIR548I2-201ENST00000408348 149 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 AC244090.1-201ENST00000441884 93 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 SNORD57-201ENST00000448188 72 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 SCARNA18B-201ENST00000458806 135 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 snoU13.13-201ENST00000458842 104 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 RNU6-706P-201ENST00000517229 104 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 AL669831.3-213ENST00000636676 183 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 MIR4320-201ENST00000636981 65 ntBASIC-1.58□□□□□ -2.66
HMGB3O15347 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 AC098614.3-201ENST00000438957 440 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 C8orf59P2-201ENST00000603441 271 ntBASIC-1.59□□□□□ -2.66
HMGB3O15347 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 SNORD115-20-201ENST00000365099 82 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 RNU6-937P-201ENST00000384325 106 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 MIR517B-201ENST00000385102 67 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 RNU7-195P-201ENST00000458793 62 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 SNORD22.1-201ENST00000516331 125 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 AC145350.1-201ENST00000567426 208 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 MIR3611-201ENST00000584484 83 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 VN1R91P-201ENST00000594377 169 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 AC145423.2-201ENST00000610631 239 ntBASIC-1.6□□□□□ -2.67
HMGB3O15347 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 RNU6-524P-201ENST00000384270 107 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 MT-TY-201ENST00000387409 66 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 AC022137.1-201ENST00000483735 151 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 SEPT14P8-201ENST00000508026 178 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 RNU7-70P-201ENST00000516941 66 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 MIR3129-201ENST00000581095 76 ntBASIC-1.61□□□□□ -2.67
HMGB3O15347 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 RNU6-510P-201ENST00000391239 108 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.62□□□□□ -2.67
HMGB3O15347 MTND1P1-201ENST00000445453 368 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 SNORA40.17-201ENST00000517256 115 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 MIR4500-201ENST00000579472 76 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 SNORD113-5-201ENST00000607261 78 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 AL008718.3-201ENST00000610217 321 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 AC007485.1-201ENST00000616755 206 ntBASIC-1.62□□□□□ -2.67
HMGB3O15347 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 SNORD63B-201ENST00000411005 70 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.63□□□□□ -2.67
HMGB3O15347 AC096644.2-201ENST00000429278 159 ntBASIC-1.63□□□□□ -2.67
HMGB3O15347 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.63□□□□□ -2.67
HMGB3O15347 MIR409-201ENST00000362237 79 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 SNORD115-25-201ENST00000362619 82 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 SNORA32-201ENST00000384072 121 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 RNU7-113P-201ENST00000459273 62 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 MRPS35P2-201ENST00000508242 191 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 RNA5SP33-201ENST00000516687 98 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 AL121655.1-201ENST00000605811 308 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 AC133104.2-201ENST00000615272 193 ntBASIC-1.64□□□□□ -2.67
HMGB3O15347 RNY4P14-201ENST00000363656 96 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 SNORA49-201ENST00000386157 136 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 RNA5SP144-201ENST00000410846 116 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 PMCHL1-202ENST00000423102 261 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 AP000533.3-201ENST00000447704 118 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 SNRPGP8-201ENST00000454064 226 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 RNU6-415P-201ENST00000516252 97 ntBASIC-1.65□□□□□ -2.67
HMGB3O15347 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.66□□□□□ -2.68
HMGB3O15347 RNU6-973P-201ENST00000364690 107 ntBASIC-1.66□□□□□ -2.68
HMGB3O15347 MTND3P8-201ENST00000412909 339 ntBASIC-1.66□□□□□ -2.68
HMGB3O15347 AC006504.6-201ENST00000590142 199 ntBASIC-1.66□□□□□ -2.68
HMGB3O15347 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.66□□□□□ -2.68
HMGB3O15347 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.66□□□□□ -2.68
HMGB3O15347 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.67□□□□□ -2.68
HMGB3O15347 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.67□□□□□ -2.68
HMGB3O15347 SNORD74.6-201ENST00000364796 70 ntBASIC-1.67□□□□□ -2.68
HMGB3O15347 MIR2113-201ENST00000459007 91 ntBASIC-1.67□□□□□ -2.68
HMGB3O15347 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.67□□□□□ -2.68
HMGB3O15347 AC093783.1-201ENST00000612976 329 ntBASIC-1.67□□□□□ -2.68
HMGB3O15347 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 RNU6-310P-201ENST00000384655 107 ntBASIC-1.68□□□□□ -2.68
HMGB3O15347 MIR652-201ENST00000385278 98 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms