Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU6-1100P-201ENST00000410691 104 ntBASIC0.69□□□□□ -2.3
TO15178 RNU6-860P-201ENST00000410860 104 ntBASIC0.69□□□□□ -2.3
TO15178 RNU6-1217P-201ENST00000411276 104 ntBASIC0.69□□□□□ -2.3
TO15178 RNU6-785P-201ENST00000411324 104 ntBASIC0.69□□□□□ -2.3
TO15178 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
TO15178 RNU7-56P-201ENST00000458744 62 ntBASIC0.69□□□□□ -2.3
TO15178 U6.90-201ENST00000614007 104 ntBASIC0.69□□□□□ -2.3
TO15178 U6.70-201ENST00000620287 104 ntBASIC0.69□□□□□ -2.3
TO15178 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
TO15178 Y_RNA.272-201ENST00000364696 102 ntBASIC0.68□□□□□ -2.3
TO15178 RNU6-364P-201ENST00000384387 107 ntBASIC0.68□□□□□ -2.3
TO15178 MIR598-201ENST00000384868 97 ntBASIC0.68□□□□□ -2.3
TO15178 AL022718.1-201ENST00000412004 84 ntBASIC0.68□□□□□ -2.3
TO15178 RPS29P1-201ENST00000465274 159 ntBASIC0.68□□□□□ -2.3
TO15178 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
TO15178 Y_RNA.757-201ENST00000578934 114 ntBASIC0.68□□□□□ -2.3
TO15178 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.68□□□□□ -2.3
TO15178 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
TO15178 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.68□□□□□ -2.3
TO15178 Y_RNA.584-201ENST00000391090 114 ntBASIC0.67□□□□□ -2.3
TO15178 SNORD93-201ENST00000408813 74 ntBASIC0.67□□□□□ -2.3
TO15178 RNA5SP144-201ENST00000410846 116 ntBASIC0.67□□□□□ -2.3
TO15178 RNU7-156P-201ENST00000517214 74 ntBASIC0.67□□□□□ -2.3
TO15178 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
TO15178 MIR3658-201ENST00000636291 56 ntBASIC0.67□□□□□ -2.3
TO15178 SNORD114-26-201ENST00000363543 72 ntBASIC0.66□□□□□ -2.3
TO15178 RNU6-690P-201ENST00000365242 106 ntBASIC0.66□□□□□ -2.3
TO15178 SNORA18-201ENST00000384416 132 ntBASIC0.66□□□□□ -2.3
TO15178 MIR573-201ENST00000384964 99 ntBASIC0.66□□□□□ -2.3
TO15178 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
TO15178 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
TO15178 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
TO15178 AC141846.1-201ENST00000568348 142 ntBASIC0.66□□□□□ -2.3
TO15178 MIR151B-201ENST00000584249 96 ntBASIC0.66□□□□□ -2.3
TO15178 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TO15178 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
TO15178 RNU7-113P-201ENST00000459273 62 ntBASIC0.65□□□□□ -2.31
TO15178 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
TO15178 SNORD92-201ENST00000585078 85 ntBASIC0.65□□□□□ -2.31
TO15178 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
TO15178 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.65□□□□□ -2.31
TO15178 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
TO15178 Y_RNA.120-201ENST00000363304 110 ntBASIC0.64□□□□□ -2.31
TO15178 Y_RNA.205-201ENST00000364128 113 ntBASIC0.64□□□□□ -2.31
TO15178 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TO15178 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
TO15178 RNU6-1086P-201ENST00000410930 100 ntBASIC0.64□□□□□ -2.31
TO15178 RNU7-102P-201ENST00000458948 62 ntBASIC0.64□□□□□ -2.31
TO15178 RNU6-1258P-201ENST00000516911 111 ntBASIC0.64□□□□□ -2.31
TO15178 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
TO15178 AC112693.2-201ENST00000556538 232 ntBASIC0.64□□□□□ -2.31
TO15178 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TO15178 Y_RNA.171-201ENST00000363760 102 ntBASIC0.63□□□□□ -2.31
TO15178 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
TO15178 RNU6-449P-201ENST00000383914 107 ntBASIC0.63□□□□□ -2.31
TO15178 RNU6-949P-201ENST00000384040 107 ntBASIC0.63□□□□□ -2.31
TO15178 RNU6-342P-201ENST00000384521 104 ntBASIC0.63□□□□□ -2.31
TO15178 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
TO15178 RNU4-83P-201ENST00000410863 133 ntBASIC0.63□□□□□ -2.31
TO15178 AC074198.2-201ENST00000508153 258 ntBASIC0.63□□□□□ -2.31
TO15178 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
TO15178 RNU6-794P-201ENST00000517261 64 ntBASIC0.63□□□□□ -2.31
TO15178 RNU2-60P-201ENST00000517290 128 ntBASIC0.63□□□□□ -2.31
TO15178 AC133485.4-201ENST00000561835 220 ntBASIC0.63□□□□□ -2.31
TO15178 AC138907.4-201ENST00000570107 226 ntBASIC0.63□□□□□ -2.31
TO15178 AC090897.1-201ENST00000580909 226 ntBASIC0.63□□□□□ -2.31
TO15178 MIR4305-201ENST00000583252 102 ntBASIC0.63□□□□□ -2.31
TO15178 AC090425.1-201ENST00000610007 140 ntBASIC0.63□□□□□ -2.31
TO15178 AC022709.1-201ENST00000615967 87 ntBASIC0.63□□□□□ -2.31
TO15178 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
TO15178 SNORD115-2-201ENST00000362842 82 ntBASIC0.62□□□□□ -2.31
TO15178 Y_RNA.270-201ENST00000364693 104 ntBASIC0.62□□□□□ -2.31
TO15178 SNORD115-20-201ENST00000365099 82 ntBASIC0.62□□□□□ -2.31
TO15178 RNU4-11P-201ENST00000365287 132 ntBASIC0.62□□□□□ -2.31
TO15178 RNY1P4-201ENST00000384595 115 ntBASIC0.62□□□□□ -2.31
TO15178 U8.15-201ENST00000390947 134 ntBASIC0.62□□□□□ -2.31
TO15178 Y_RNA.580-201ENST00000391004 95 ntBASIC0.62□□□□□ -2.31
TO15178 AL603914.1-201ENST00000401964 204 ntBASIC0.62□□□□□ -2.31
TO15178 RNA5SP33-201ENST00000516687 98 ntBASIC0.62□□□□□ -2.31
TO15178 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
TO15178 Y_RNA.778-201ENST00000620203 90 ntBASIC0.62□□□□□ -2.31
TO15178 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
TO15178 RNU6-151P-201ENST00000364158 107 ntBASIC0.61□□□□□ -2.31
TO15178 Y_RNA.251-201ENST00000364551 99 ntBASIC0.61□□□□□ -2.31
TO15178 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
TO15178 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
TO15178 RNU6-394P-201ENST00000410735 107 ntBASIC0.61□□□□□ -2.31
TO15178 RNU6-240P-201ENST00000516098 97 ntBASIC0.61□□□□□ -2.31
TO15178 Y_RNA.690-201ENST00000516603 95 ntBASIC0.61□□□□□ -2.31
TO15178 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
TO15178 FTX_2.1-201ENST00000618816 94 ntBASIC0.61□□□□□ -2.31
TO15178 RNY1P13-201ENST00000365030 105 ntBASIC0.6□□□□□ -2.31
TO15178 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
TO15178 RNU7-79P-201ENST00000516082 62 ntBASIC0.6□□□□□ -2.31
TO15178 RNU6-448P-201ENST00000517052 107 ntBASIC0.6□□□□□ -2.31
TO15178 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
TO15178 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
TO15178 AC008608.1-201ENST00000603910 127 ntBASIC0.6□□□□□ -2.31
TO15178 AC021443.1-201ENST00000604478 211 ntBASIC0.6□□□□□ -2.31
TO15178 MIR18A-201ENST00000362310 71 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms