Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL590095.2-201ENST00000604136 117 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNA5SP257-201ENST00000363023 116 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 Y_RNA.563-201ENST00000384707 108 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 SNORA75.2-201ENST00000391138 150 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 SNORA75.3-201ENST00000391231 150 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 RNU7-21P-201ENST00000459430 62 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 COX6CP6-201ENST00000490840 228 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 RNU6-781P-201ENST00000516377 101 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 MIR5000-201ENST00000577717 103 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 AP000753.3-201ENST00000604083 169 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 MIR6767-201ENST00000637302 66 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 MIR3914-2-201ENST00000637339 95 ntBASIC1.68□□□□□ -2.14
CCDC85CA6NKD9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 AL591704.2-201ENST00000421658 181 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 RNU7-107P-201ENST00000459121 61 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 AC004812.1-201ENST00000540773 146 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
CCDC85CA6NKD9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 RNU6-1168P-201ENST00000390831 104 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 snoU13.2-201ENST00000459201 104 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 RNU6-62P-201ENST00000516526 102 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
CCDC85CA6NKD9 Y_RNA.85-201ENST00000363014 111 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 AL512326.2-201ENST00000426359 151 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 RNU7-113P-201ENST00000459273 62 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 RNU6-1333P-201ENST00000516162 93 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 SNORA70.22-201ENST00000517160 124 ntBASIC1.65□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 RNU6-654P-201ENST00000364373 107 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 SNORA19-201ENST00000384737 128 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 RPS23P4-201ENST00000487908 423 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 AC025166.1-201ENST00000612411 163 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 AL365222.1-201ENST00000614661 98 ntBASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC85CA6NKD9 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.346-201ENST00000365385 112 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 SNORA25-201ENST00000384384 134 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 SNORD12C-201ENST00000386307 89 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 AC098934.3-201ENST00000430450 190 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 RNU7-90P-201ENST00000459216 62 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 RNU6-1061P-201ENST00000516530 99 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 AL109933.3-201ENST00000619095 188 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 AC027335.2-201ENST00000624030 375 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 U6.95-201ENST00000636931 70 ntBASIC1.63□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 MIR222-201ENST00000384992 110 ntBASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 AL606753.1-201ENST00000427435 87 ntBASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 RNA5SP121-201ENST00000516537 101 ntBASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC85CA6NKD9 RNA5SP205-201ENST00000364653 136 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 MIR1263-201ENST00000408324 86 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.630-201ENST00000411370 108 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 RNA5SP330-201ENST00000517096 96 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 U2.22-201ENST00000636441 106 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 MIR6086-201ENST00000638065 55 ntBASIC1.61□□□□□ -2.15
CCDC85CA6NKD9 SNORD113.3-201ENST00000364630 78 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 RNU6-1104P-201ENST00000384723 104 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 MIR19B1-201ENST00000384829 87 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 SUMO2P12-201ENST00000405924 140 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 RNU2-51P-201ENST00000410708 197 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 MIR6740-201ENST00000618268 113 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 AL627230.5-201ENST00000619807 58 ntBASIC1.6□□□□□ -2.15
CCDC85CA6NKD9 MTND5P18-201ENST00000445624 1801 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 MIR588-201ENST00000384900 83 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 MRPL35P3-201ENST00000421557 364 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 RNU7-62P-201ENST00000458856 62 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 RNU6-313P-201ENST00000516317 112 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 RNA5SP33-201ENST00000516687 98 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 RNU7-35P-201ENST00000517174 62 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 AC022523.2-201ENST00000561045 150 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 MIR924-201ENST00000638017 53 ntBASIC1.59□□□□□ -2.15
CCDC85CA6NKD9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC85CA6NKD9 Y_RNA.261-201ENST00000364631 102 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 Y_RNA.353-201ENST00000365440 108 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 MIR548I2-201ENST00000408348 149 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 RNU4-69P-201ENST00000410677 143 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 AL662814.1-201ENST00000617364 121 ntBASIC1.58□□□□□ -2.16
CCDC85CA6NKD9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 SNORA18-201ENST00000384416 132 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 RNU6-205P-201ENST00000390858 107 ntBASIC1.57□□□□□ -2.16
CCDC85CA6NKD9 RNU6-1154P-201ENST00000391001 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms