Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR4781-201ENST00000585250 76 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 U6.95-201ENST00000636931 70 ntBASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNA5SP205-201ENST00000364653 136 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD111-201ENST00000408139 94 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU6-1086P-201ENST00000410930 100 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 SNORD83.1-201ENST00000411362 77 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR1270-201ENST00000459320 83 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 RNU7-35P-201ENST00000517174 62 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR3163-201ENST00000581592 73 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 AL359881.1-201ENST00000602916 267 ntBASIC1.03□□□□□ -2.24
IGHV4-28A0A0C4DH34 MIR30D-201ENST00000362283 70 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR320A-201ENST00000385302 82 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-994P-201ENST00000410507 111 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 Y_RNA.649-201ENST00000459077 103 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU7-79P-201ENST00000516082 62 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR4421-201ENST00000578133 69 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
IGHV4-28A0A0C4DH34 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 SNORA7.1-201ENST00000363750 139 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNY1P13-201ENST00000365030 105 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 Y_RNA.353-201ENST00000365440 108 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 Y_RNA.563-201ENST00000384707 108 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR548A3-201ENST00000385297 97 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 SNORD77B-201ENST00000391112 67 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC015818.7-201ENST00000428754 109 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC087499.7-201ENST00000441958 109 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
IGHV4-28A0A0C4DH34 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-934P-201ENST00000365154 107 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-1081P-201ENST00000384537 107 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR548A1-201ENST00000385041 97 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 RPL39P25-201ENST00000449384 154 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-1053P-201ENST00000515930 101 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 MTND5P34-201ENST00000568888 325 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 AL670379.3-201ENST00000605040 251 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 AL157834.3-201ENST00000615543 103 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC087741.2-201ENST00000619415 172 ntBASIC1□□□□□ -2.25
IGHV4-28A0A0C4DH34 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR548D2-201ENST00000384955 97 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MT-TF-201ENST00000387314 71 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR548I2-201ENST00000408348 149 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR18B-201ENST00000454574 71 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 SNORD67.1-201ENST00000516618 108 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR4771-2-201ENST00000577758 74 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR4771-1-201ENST00000582617 74 ntBASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC023934.1-201ENST00000574529 2389 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNY4P6-201ENST00000363667 96 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU6-616P-201ENST00000384353 107 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 AL359821.1-201ENST00000605519 182 ntBASIC0.98□□□□□ -2.25
IGHV4-28A0A0C4DH34 Y_RNA.291-201ENST00000364886 113 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC067940.1-201ENST00000458411 300 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU1-123P-201ENST00000458950 160 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 RNU7-137P-201ENST00000516788 62 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC007012.1-201ENST00000567192 175 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR548AI-201ENST00000579940 88 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 Y_RNA.773-201ENST00000607168 90 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 MIR7974-201ENST00000615835 79 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 AC105081.1-201ENST00000617727 106 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 AL353770.2-201ENST00000620024 78 ntBASIC0.97□□□□□ -2.25
IGHV4-28A0A0C4DH34 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 SNORD115-19-201ENST00000363098 82 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 SNORD115-18-201ENST00000363293 82 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 SNORD115-17-201ENST00000364612 82 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 Y_RNA.344-201ENST00000365381 112 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 Y_RNA.362-201ENST00000365518 110 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU6-476P-201ENST00000384726 107 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR100-201ENST00000385259 80 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR618-201ENST00000385287 98 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 U8.15-201ENST00000390947 134 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR1257-201ENST00000408490 117 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU6-1064P-201ENST00000410626 104 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU6-321P-201ENST00000410912 106 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RPS26P5-201ENST00000418544 335 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR1255B1-201ENST00000636325 63 ntBASIC0.96□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
IGHV4-28A0A0C4DH34 Y_RNA.327-201ENST00000365201 102 ntBASIC0.95□□□□□ -2.26
IGHV4-28A0A0C4DH34 RNU6-1144P-201ENST00000384247 104 ntBASIC0.95□□□□□ -2.26
IGHV4-28A0A0C4DH34 MIR206-201ENST00000384872 86 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms