Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Gm14859-201ENSMUST00000117752 357 ntBASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc30Q8BVF4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Rprl3-201ENSMUST00000157400 290 ntBASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc30Q8BVF4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Gm44454-201ENSMUST00000198541 138 ntBASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc30Q8BVF4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Ccdc30Q8BVF4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.64■□□□□ 0.9
Ccdc30Q8BVF4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc30Q8BVF4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc30Q8BVF4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc30Q8BVF4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 Gm25406-201ENSMUST00000157599 105 ntBASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc30Q8BVF4 App-207ENSMUST00000227737 2827 ntBASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc30Q8BVF4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc30Q8BVF4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms