Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Gm11355-201ENSMUST00000121120 306 ntBASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.43□□□□□ -0.26
Tnfrsf1aP25118 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Gm37722-201ENSMUST00000193757 208 ntBASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms