Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-554P-201ENST00000410466 106 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 RPL39P34-201ENST00000477141 156 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 RNU1-92P-201ENST00000517017 135 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 MIR517C-201ENST00000385103 95 ntBASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 MIR6841-201ENST00000637129 72 ntBASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 SNORA1.1-201ENST00000364671 133 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.323-201ENST00000365157 109 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-32P-201ENST00000383948 107 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-13P-201ENST00000384248 107 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-12P-201ENST00000384604 107 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-41P-201ENST00000384741 107 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RPS3AP1-201ENST00000413190 320 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 HMGN1P33-201ENST00000432945 451 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 AC113410.1-201ENST00000505029 247 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNA5SP33-201ENST00000516687 98 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 AC068339.1-201ENST00000526965 141 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 MIR5009-201ENST00000578736 100 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-94P-201ENST00000607728 107 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTDP1Q9Y5B0 MIR337-201ENST00000362281 93 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 U8.6-201ENST00000364939 135 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-756P-201ENST00000383997 107 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.495-201ENST00000384435 112 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 RNA5SP89-201ENST00000410300 108 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 RNU4-69P-201ENST00000410677 143 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-168P-201ENST00000516189 101 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTDP1Q9Y5B0 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 SNORD115-2-201ENST00000362842 82 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 SNORD115-20-201ENST00000365099 82 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 SNORA51.5-201ENST00000384126 131 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 SNORD111.1-201ENST00000516421 86 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-922P-201ENST00000516753 99 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 MIR8055-201ENST00000610739 97 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 AC087741.2-201ENST00000619415 172 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 MIR4251-201ENST00000635819 61 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 AL162726.3-218ENST00000636401 95 ntBASIC1.8□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-766P-201ENST00000362478 107 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 SNORD77B-201ENST00000391112 67 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 RPL39P25-201ENST00000449384 154 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 RNU7-95P-201ENST00000459222 64 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 SNORA31.24-201ENST00000517232 57 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 MIR548AE2-201ENST00000583456 67 ntBASIC1.79□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-1113P-201ENST00000384348 107 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-816P-201ENST00000390914 107 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 MIR1912-201ENST00000410389 80 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 CYP3A52P-201ENST00000563326 91 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 MIR548AO-201ENST00000579992 96 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 MIR4781-201ENST00000585250 76 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 Z97988.1-201ENST00000637697 135 ntBASIC1.78□□□□□ -2.12
CTDP1Q9Y5B0 ZNF209P-201ENST00000593450 2304 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 SNORA32-201ENST00000384072 121 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 SNORD41-201ENST00000386967 70 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 AL357312.1-201ENST00000603879 298 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 AL359821.1-201ENST00000605519 182 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 MIR8063-201ENST00000621930 81 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
CTDP1Q9Y5B0 SNORD115-19-201ENST00000363098 82 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 SNORD115-18-201ENST00000363293 82 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 SNORD115-17-201ENST00000364612 82 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 MIR1304-201ENST00000408243 91 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 RNU6-537P-201ENST00000517277 103 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.76□□□□□ -2.13
CTDP1Q9Y5B0 RNA5SP48-201ENST00000363969 126 ntBASIC1.75□□□□□ -2.13
CTDP1Q9Y5B0 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms