Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-860P-201ENST00000410860 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-785P-201ENST00000411324 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 MTND2P23-201ENST00000422990 651 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 MTCYBP9-201ENST00000431021 303 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU7-156P-201ENST00000517214 74 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 U6.90-201ENST00000614007 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 U6.70-201ENST00000620287 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-597P-201ENST00000365620 102 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 SNORA20-201ENST00000384662 132 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 MIR563-201ENST00000385080 79 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 MT-TF-201ENST00000387314 71 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 MIR378D2-201ENST00000580636 98 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 RN7SL793P-201ENST00000583259 296 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 AL365205.2-201ENST00000594586 68 ntBASIC0.45□□□□□ -2.34
ATG4BQ9Y4P1 MIR30D-201ENST00000362283 70 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 RNY4P28-201ENST00000365281 93 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 RNY1P4-201ENST00000384595 115 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 SNORD93-201ENST00000408813 74 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 MIR3152-201ENST00000579801 74 ntBASIC0.44□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 MIR568-201ENST00000385036 95 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-679P-201ENST00000391003 106 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 AL118496.2-201ENST00000448300 230 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 MTND1P19-201ENST00000511780 315 ntBASIC0.43□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-978P-201ENST00000364371 103 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 RNU4-16P-201ENST00000364737 141 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 RNU4-70P-201ENST00000384579 139 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 MIR4308-201ENST00000580634 81 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 AC090897.1-201ENST00000580909 226 ntBASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
ATG4BQ9Y4P1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-643P-201ENST00000384018 107 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 RNA5SP127-201ENST00000411051 133 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 Y_RNA.668-201ENST00000516233 93 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 SCARNA15.1-201ENST00000516384 125 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 MIR3128-201ENST00000581957 66 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 SNORD92-201ENST00000585078 85 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 AL662814.1-201ENST00000617364 121 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 AC021613.1-201ENST00000623880 111 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
ATG4BQ9Y4P1 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.20-201ENST00000362479 113 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 SNORA22.1-201ENST00000362701 134 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 RNU4-83P-201ENST00000410863 133 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 AC092634.7-201ENST00000621022 103 ntBASIC0.4□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-403P-201ENST00000363163 104 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 RNA5SP117-201ENST00000365294 118 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 AC002350.1-201ENST00000490759 375 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 AC062037.2-201ENST00000610137 73 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 MIR6779-201ENST00000617283 64 ntBASIC0.39□□□□□ -2.35
ATG4BQ9Y4P1 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.60-201ENST00000362831 98 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-1336P-201ENST00000383886 109 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 MIR193B-201ENST00000384907 83 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
ATG4BQ9Y4P1 SNORA25.7-201ENST00000364375 127 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 RNU6-275P-201ENST00000364910 107 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 MIR624-201ENST00000385217 97 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 SNORA25.12-201ENST00000516202 82 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 SCARNA15-202ENST00000516881 127 ntBASIC0.37□□□□□ -2.35
ATG4BQ9Y4P1 AC141846.1-201ENST00000568348 142 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms