Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 Y_RNA.528-201ENST00000384575 108 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA2B-201ENST00000384583 137 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU7-62P-201ENST00000458856 62 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU7-21P-201ENST00000459430 62 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC022523.2-201ENST00000561045 150 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD113-1-201ENST00000365321 69 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR588-201ENST00000384900 83 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNA5SP237-201ENST00000410414 113 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU7-90P-201ENST00000459216 62 ntBASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR377-201ENST00000362145 69 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA18-201ENST00000384416 132 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.630-201ENST00000411370 108 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 snoU13.2-201ENST00000459201 104 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.712-201ENST00000517011 92 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC023827.1-201ENST00000569247 97 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
NIPSNAP3AQ9UFN0 MTND5P18-201ENST00000445624 1801 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD115-2-201ENST00000362842 82 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD115-20-201ENST00000365099 82 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA32-201ENST00000384072 121 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-342P-201ENST00000384521 104 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 AL603825.1-201ENST00000438481 80 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 COX6CP6-201ENST00000490840 228 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-313P-201ENST00000516317 112 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR548AE2-201ENST00000583456 67 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR3914-2-201ENST00000637339 95 ntBASIC1.36□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORD113.3-201ENST00000364630 78 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-1168P-201ENST00000390831 104 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 RPS23P4-201ENST00000487908 423 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 MIR6740-201ENST00000618268 113 ntBASIC1.35□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-479P-201ENST00000516348 105 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 U6.95-201ENST00000636931 70 ntBASIC1.34□□□□□ -2.19
NIPSNAP3AQ9UFN0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.33□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU4-69P-201ENST00000410677 143 ntBASIC1.33□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU2-51P-201ENST00000410708 197 ntBASIC1.33□□□□□ -2.2
NIPSNAP3AQ9UFN0 AL359881.1-201ENST00000602916 267 ntBASIC1.33□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORA22C-201ENST00000384614 134 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORD111-201ENST00000408139 94 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC002429.1-201ENST00000437672 148 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 RPL39P25-201ENST00000449384 154 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU7-6P-201ENST00000516845 62 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 MIR3163-201ENST00000581592 73 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC106800.4-201ENST00000614905 153 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AL662814.1-201ENST00000617364 121 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC012676.2-201ENST00000619258 186 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-580P-201ENST00000365159 107 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORD77B-201ENST00000391112 67 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORA17.3-201ENST00000391159 129 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-994P-201ENST00000410507 111 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 SNORD33.1-201ENST00000516213 88 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
NIPSNAP3AQ9UFN0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 RNU6-1081P-201ENST00000384537 107 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 MT-TI-201ENST00000387365 69 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC108729.3-201ENST00000513484 108 ntBASIC1.3□□□□□ -2.2
NIPSNAP3AQ9UFN0 AC141846.1-201ENST00000568348 142 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms