Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL596211.1-201ENST00000569873 2277 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AL035398.1-201ENST00000430869 322 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 RNU7-45P-201ENST00000459460 63 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 RNU7-41P-201ENST00000515917 61 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 RNA5SP220-201ENST00000516298 104 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 RNU2-35P-201ENST00000516446 142 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 MIR3192-201ENST00000584920 77 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 MIR8055-201ENST00000610739 97 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AL137067.1-201ENST00000615933 120 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AC243994.1-201ENST00000618627 109 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 MIR6841-201ENST00000637129 72 ntBASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 MT-TI-201ENST00000387365 69 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 RNU6-747P-201ENST00000390928 104 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 RNU6-241P-201ENST00000391148 104 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 RNU6-177P-201ENST00000411257 104 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 POLR2J4-204ENST00000418424 324 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 SNORD33.1-201ENST00000516213 88 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 RNU6-958P-201ENST00000516995 106 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 AL096861.1-201ENST00000610899 123 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 AC021613.1-201ENST00000623880 111 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
DDX43Q9NXZ2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU6-834P-201ENST00000362367 110 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU6-690P-201ENST00000365242 106 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU6-429P-201ENST00000384582 108 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 MIR1302-7-201ENST00000408841 72 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNA5SP144-201ENST00000410846 116 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 AC107297.1-201ENST00000459991 176 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU7-123P-201ENST00000515911 60 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1061P-201ENST00000516530 99 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 AP003716.2-201ENST00000528260 108 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 AC133485.4-201ENST00000561835 220 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 AC138907.4-201ENST00000570107 226 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 AC025166.1-201ENST00000612411 163 ntBASIC1.19□□□□□ -2.22
DDX43Q9NXZ2 MTND5P18-201ENST00000445624 1801 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU4-16P-201ENST00000364737 141 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.298-201ENST00000364960 107 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU6-215P-201ENST00000365169 102 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU7-67P-201ENST00000459003 62 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNY4P20-201ENST00000516678 93 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU7-53P-201ENST00000516705 60 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 RNU7-70P-201ENST00000516941 66 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 MIR548AO-201ENST00000579992 96 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 MIR4305-201ENST00000583252 102 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 AL359881.1-201ENST00000602916 267 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 U6.95-201ENST00000636931 70 ntBASIC1.18□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 SNORA51.10-201ENST00000384418 136 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 MIR1263-201ENST00000408324 86 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 RNA5SP136-201ENST00000410906 107 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 snoU13.16-201ENST00000459350 104 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 COX6CP6-201ENST00000490840 228 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 AL078603.1-201ENST00000603824 313 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 AC021443.1-201ENST00000604478 211 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 Z97988.1-201ENST00000637697 135 ntBASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
DDX43Q9NXZ2 SNORD20-201ENST00000384550 80 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 Y_RNA.528-201ENST00000384575 108 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 RNU6-476P-201ENST00000384726 107 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 RNU7-164P-201ENST00000459221 62 ntBASIC1.16□□□□□ -2.22
DDX43Q9NXZ2 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms