Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNORA53-201ENST00000391141 249 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 RNU6-475P-201ENST00000516073 104 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 AC138869.1-201ENST00000568623 124 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 MIR5688-201ENST00000580619 83 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 AL008718.3-201ENST00000610217 321 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 AC090574.1-201ENST00000623186 233 ntBASIC-0.3□□□□□ -2.46
TREX1Q9NSU2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 SNORA1-201ENST00000384107 130 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 MIR604-201ENST00000384880 94 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 RNU2-55P-201ENST00000411146 174 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 AL731563.1-201ENST00000442202 214 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 snoU13.19-201ENST00000459148 104 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 RNU6-897P-201ENST00000517135 105 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 MIR4493-201ENST00000584016 73 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 RNU1-29P-201ENST00000606574 126 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 AC091932.4-201ENST00000623386 200 ntBASIC-0.31□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 RNU6-290P-201ENST00000365212 101 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 SNORD14C-201ENST00000365382 88 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 SNORA18-201ENST00000384416 132 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 MIR548L-201ENST00000408303 86 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 AC096949.1-201ENST00000412047 152 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 AC096531.1-201ENST00000419107 107 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 RNU6-180P-201ENST00000516697 61 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 MIR3129-201ENST00000581095 76 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
TREX1Q9NSU2 SNORA22.1-201ENST00000362701 134 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 RNU6-326P-201ENST00000365480 107 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 SNORA63.7-201ENST00000365579 123 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 RNA5SP153-201ENST00000516498 76 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 SNORA27.4-201ENST00000516650 95 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 RNU7-70P-201ENST00000516941 66 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 AC011921.3-201ENST00000605540 361 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 MIR376A2-201ENST00000636782 80 ntBASIC-0.33□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 RNA5SP245-201ENST00000364239 121 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 RNY3P1-201ENST00000365085 102 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 RNU6-484P-201ENST00000384016 107 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 MIR626-201ENST00000385032 94 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 MT-TT-201ENST00000387460 66 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 RNA5SP163-201ENST00000410304 99 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 SNRPGP8-201ENST00000454064 226 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 SNORD126-201ENST00000459475 77 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 AC139792.2-201ENST00000624218 587 ntBASIC-0.34□□□□□ -2.46
TREX1Q9NSU2 MIR101-1-201ENST00000362265 75 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 SNORA63.5-201ENST00000363548 123 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 MIR501-201ENST00000390204 84 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 HMGN2P22-201ENST00000427588 175 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 RNU6-531P-201ENST00000516694 104 ntBASIC-0.35□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 RNU4-73P-201ENST00000363164 141 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 SNORD115-24-201ENST00000363528 82 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 RNA5SP368-201ENST00000364298 116 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 RNU6-450P-201ENST00000364654 107 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 RNY1P13-201ENST00000365030 105 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 RNU6-211P-201ENST00000384047 107 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 SNORA40.15-201ENST00000516884 107 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 AP003072.1-201ENST00000531740 145 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 MIR5197-201ENST00000583721 112 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 MIR548AD-201ENST00000584780 82 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 AC108676.2-201ENST00000605225 163 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 AC021613.1-201ENST00000623880 111 ntBASIC-0.36□□□□□ -2.47
TREX1Q9NSU2 MIR101-2-201ENST00000362195 79 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 RNU4-58P-201ENST00000363192 141 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 MIR196A2-201ENST00000385189 110 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 AL022718.1-201ENST00000412004 84 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 RPS29P8-201ENST00000445109 171 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 FGF7P4-201ENST00000509595 295 ntBASIC-0.37□□□□□ -2.47
TREX1Q9NSU2 FTX_2.1-201ENST00000618816 94 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 303.4 ms