Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC021613.1-201ENST00000623880 111 ntBASIC0.69□□□□□ -2.3
Q9N2K0 AC010332.2-201ENST00000613083 1904 ntBASIC0.69□□□□□ -2.3
Q9N2K0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Q9N2K0 RNU6-200P-201ENST00000364743 107 ntBASIC0.68□□□□□ -2.3
Q9N2K0 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
Q9N2K0 SNORD12C-201ENST00000386307 89 ntBASIC0.68□□□□□ -2.3
Q9N2K0 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
Q9N2K0 SNORA75.5-201ENST00000391291 81 ntBASIC0.68□□□□□ -2.3
Q9N2K0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.68□□□□□ -2.3
Q9N2K0 RNU7-45P-201ENST00000459460 63 ntBASIC0.68□□□□□ -2.3
Q9N2K0 RNU6-1219P-201ENST00000516143 112 ntBASIC0.68□□□□□ -2.3
Q9N2K0 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
Q9N2K0 AP002392.1-201ENST00000537692 208 ntBASIC0.68□□□□□ -2.3
Q9N2K0 MIR4676-201ENST00000583078 72 ntBASIC0.68□□□□□ -2.3
Q9N2K0 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
Q9N2K0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.68□□□□□ -2.3
Q9N2K0 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
Q9N2K0 MIR6841-201ENST00000637129 72 ntBASIC0.68□□□□□ -2.3
Q9N2K0 MIR938-201ENST00000401216 83 ntBASIC0.67□□□□□ -2.3
Q9N2K0 MIR1257-201ENST00000408490 117 ntBASIC0.67□□□□□ -2.3
Q9N2K0 MIR548J-201ENST00000408833 112 ntBASIC0.67□□□□□ -2.3
Q9N2K0 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
Q9N2K0 AC078938.1-201ENST00000620993 318 ntBASIC0.67□□□□□ -2.3
Q9N2K0 MTND5P32-201ENST00000560711 1802 ntBASIC0.66□□□□□ -2.3
Q9N2K0 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
Q9N2K0 SNORA22.1-201ENST00000362701 134 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNY1P6-201ENST00000384193 109 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU6-768P-201ENST00000384683 107 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU6-239P-201ENST00000390990 99 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
Q9N2K0 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU6-388P-201ENST00000517012 105 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU6-389P-201ENST00000517048 105 ntBASIC0.66□□□□□ -2.3
Q9N2K0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.66□□□□□ -2.3
Q9N2K0 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
Q9N2K0 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
Q9N2K0 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
Q9N2K0 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
Q9N2K0 MIR30D-201ENST00000362283 70 ntBASIC0.65□□□□□ -2.31
Q9N2K0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.65□□□□□ -2.31
Q9N2K0 RNU6-818P-201ENST00000364837 108 ntBASIC0.65□□□□□ -2.31
Q9N2K0 RNU6-1318P-201ENST00000365389 103 ntBASIC0.65□□□□□ -2.31
Q9N2K0 Y_RNA.466-201ENST00000384294 113 ntBASIC0.65□□□□□ -2.31
Q9N2K0 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.31
Q9N2K0 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
Q9N2K0 MIR125B2-201ENST00000385128 89 ntBASIC0.65□□□□□ -2.31
Q9N2K0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
Q9N2K0 MTATP6P21-201ENST00000440681 189 ntBASIC0.65□□□□□ -2.31
Q9N2K0 RNU7-185P-201ENST00000459215 60 ntBASIC0.65□□□□□ -2.31
Q9N2K0 RNU7-120P-201ENST00000459334 63 ntBASIC0.65□□□□□ -2.31
Q9N2K0 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
Q9N2K0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
Q9N2K0 AC020891.4-201ENST00000605745 93 ntBASIC0.65□□□□□ -2.31
Q9N2K0 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
Q9N2K0 AL662814.1-201ENST00000617364 121 ntBASIC0.65□□□□□ -2.31
Q9N2K0 MIR6844-201ENST00000637122 62 ntBASIC0.65□□□□□ -2.31
Q9N2K0 Y_RNA.29-201ENST00000362570 113 ntBASIC0.64□□□□□ -2.31
Q9N2K0 Y_RNA.240-201ENST00000364469 95 ntBASIC0.64□□□□□ -2.31
Q9N2K0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.64□□□□□ -2.31
Q9N2K0 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
Q9N2K0 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
Q9N2K0 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
Q9N2K0 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
Q9N2K0 RNU4-84P-201ENST00000364200 139 ntBASIC0.63□□□□□ -2.31
Q9N2K0 Y_RNA.257-201ENST00000364596 102 ntBASIC0.63□□□□□ -2.31
Q9N2K0 Y_RNA.785-201ENST00000384290 109 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-364P-201ENST00000384387 107 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-447P-201ENST00000410293 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-355P-201ENST00000410427 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-791P-201ENST00000410467 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-705P-201ENST00000410601 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-860P-201ENST00000410860 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU5E-9P-201ENST00000411164 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-785P-201ENST00000411324 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.63□□□□□ -2.31
Q9N2K0 RPL39P25-201ENST00000449384 154 ntBASIC0.63□□□□□ -2.31
Q9N2K0 RNU6-138P-201ENST00000515952 107 ntBASIC0.63□□□□□ -2.31
Q9N2K0 AC022559.1-201ENST00000520905 205 ntBASIC0.63□□□□□ -2.31
Q9N2K0 AC011603.4-201ENST00000611325 277 ntBASIC0.63□□□□□ -2.31
Q9N2K0 U6.90-201ENST00000614007 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 U6.70-201ENST00000620287 104 ntBASIC0.63□□□□□ -2.31
Q9N2K0 Y_RNA.662-201ENST00000516028 97 ntBASIC0.62□□□□□ -2.31
Q9N2K0 RNU7-121P-201ENST00000516604 62 ntBASIC0.62□□□□□ -2.31
Q9N2K0 SNORD92-201ENST00000585078 85 ntBASIC0.62□□□□□ -2.31
Q9N2K0 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.62□□□□□ -2.31
Q9N2K0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Q9N2K0 MIR613-201ENST00000385248 95 ntBASIC0.61□□□□□ -2.31
Q9N2K0 RNU6-1135P-201ENST00000411083 103 ntBASIC0.61□□□□□ -2.31
Q9N2K0 AL022718.1-201ENST00000412004 84 ntBASIC0.61□□□□□ -2.31
Q9N2K0 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
Q9N2K0 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
Q9N2K0 RNA5SP236-201ENST00000516169 116 ntBASIC0.61□□□□□ -2.31
Q9N2K0 DNAJC19P2-201ENST00000593340 302 ntBASIC0.61□□□□□ -2.31
Q9N2K0 MIR373-201ENST00000362273 69 ntBASIC0.6□□□□□ -2.31
Q9N2K0 RNU6-349P-201ENST00000362402 107 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms