Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 MIR5197-201ENST00000583721 112 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.771-201ENST00000598668 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 MIR8066-201ENST00000617280 78 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 AL662814.1-201ENST00000617364 121 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.789-201ENST00000622480 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 AC091932.4-201ENST00000623386 200 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.416-201ENST00000384014 113 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 U8.15-201ENST00000390947 134 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.590-201ENST00000410140 107 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 RNU7-80P-201ENST00000459562 61 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.679-201ENST00000516416 91 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 AL356055.1-201ENST00000602528 446 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 AL365265.1-201ENST00000621045 234 ntBASIC0.19□□□□□ -2.38
RPAP3Q9H6T3 RNU6-238P-201ENST00000363313 106 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 SNORA33.2-201ENST00000365413 134 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.542-201ENST00000384641 111 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 RNU6-1109P-201ENST00000391187 107 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.618-201ENST00000410949 107 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 U2.14-201ENST00000615943 113 ntBASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.18□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 RNU6-381P-201ENST00000391259 108 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 MTATP8P1-201ENST00000467115 207 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 MIR3152-201ENST00000579801 74 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
RPAP3Q9H6T3 RNU6-639P-201ENST00000384074 107 ntBASIC0.16□□□□□ -2.38
RPAP3Q9H6T3 SNORA72.6-201ENST00000384520 129 ntBASIC0.16□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.16□□□□□ -2.38
RPAP3Q9H6T3 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.16□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.176-201ENST00000363815 109 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 RNU6-728P-201ENST00000365375 104 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 RNU6-1292P-201ENST00000383856 107 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 RNU6-713P-201ENST00000384761 107 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 MTCYBP6-201ENST00000441810 138 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 RNU6-469P-201ENST00000516253 101 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 MIR4491-201ENST00000581087 68 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 MIR4282-201ENST00000583613 67 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 AL442067.1-201ENST00000613261 223 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 AC067863.3-201ENST00000624172 122 ntBASIC0.15□□□□□ -2.39
RPAP3Q9H6T3 MIR335-201ENST00000362173 94 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 RNU4-16P-201ENST00000364737 141 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.483-201ENST00000384380 101 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 SNORA20-201ENST00000384662 132 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 MT-TW-201ENST00000387382 68 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 SNORA79-201ENST00000408376 140 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 RNU6-635P-201ENST00000516651 102 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 AL365205.2-201ENST00000594586 68 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 MIR6082-201ENST00000613604 109 ntBASIC0.14□□□□□ -2.39
RPAP3Q9H6T3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 SUMO1P3-201ENST00000439961 304 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 AC069271.1-201ENST00000445577 156 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 SNORA31.14-201ENST00000516728 116 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 MTND5P34-201ENST00000568888 325 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 MIR4643-201ENST00000577473 78 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 MIR6841-201ENST00000637129 72 ntBASIC0.13□□□□□ -2.39
RPAP3Q9H6T3 RNU4-17P-201ENST00000365598 141 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 AC096949.1-201ENST00000412047 152 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 RNU6-863P-201ENST00000515989 104 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 RNY3P16-201ENST00000516338 101 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 RNA5SP268-201ENST00000516828 124 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 RNU7-70P-201ENST00000516941 66 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 MIR5190-201ENST00000581537 80 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 AC021613.1-201ENST00000623880 111 ntBASIC0.12□□□□□ -2.39
RPAP3Q9H6T3 SNORA22.1-201ENST00000362701 134 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 RNU6-797P-201ENST00000363101 109 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 SNORA18-201ENST00000384416 132 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 RNU4-43P-201ENST00000410628 137 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 AL121914.1-201ENST00000450188 156 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 SNORA25.16-201ENST00000516741 121 ntBASIC0.11□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.54-201ENST00000362766 105 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 RNU6-949P-201ENST00000384040 107 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 RNU6-765P-201ENST00000516916 99 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 AC112693.2-201ENST00000556538 232 ntBASIC0.1□□□□□ -2.39
RPAP3Q9H6T3 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 207.2 ms