Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SEPT7P4-201ENST00000437076 306 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.673-201ENST00000516306 88 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 MIR3124-201ENST00000582636 67 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 MIR4452-201ENST00000583004 71 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 SNORA4-201ENST00000584302 138 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 SNORA22.1-201ENST00000362701 134 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 SNORA36.1-201ENST00000363424 132 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-275P-201ENST00000364910 107 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.350-201ENST00000365409 98 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-643P-201ENST00000384018 107 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-364P-201ENST00000384387 107 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-327P-201ENST00000516270 127 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 MIR3678-201ENST00000578455 94 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 MIR3128-201ENST00000581957 66 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 AC078938.1-201ENST00000620993 318 ntBASIC0.28□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.75-201ENST00000362927 97 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 SNORD27-201ENST00000363981 72 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 RNU6-923P-201ENST00000364753 107 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.412-201ENST00000384001 104 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 RNU6-949P-201ENST00000384040 107 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.435-201ENST00000384095 112 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP236-201ENST00000516169 116 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP220-201ENST00000516298 104 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 MIR3152-201ENST00000579801 74 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 MIR6788-201ENST00000618842 66 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 U6.106-201ENST00000636360 105 ntBASIC0.27□□□□□ -2.37
HDHD3Q9BSH5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNU1-133P-201ENST00000364867 167 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1336P-201ENST00000383886 109 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.477-201ENST00000384352 108 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.478-201ENST00000384358 107 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNU4-83P-201ENST00000410863 133 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1023P-201ENST00000516137 106 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 AP003327.1-201ENST00000529684 127 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR5000-201ENST00000577717 103 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR4491-201ENST00000581087 68 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR151B-201ENST00000584249 96 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR3149-201ENST00000584629 83 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 Z83818.1-201ENST00000603584 150 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 AC062037.2-201ENST00000610137 73 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR6082-201ENST00000613604 109 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR8070-201ENST00000616510 88 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MIR6734-201ENST00000621166 68 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
HDHD3Q9BSH5 MTND5P32-201ENST00000560711 1802 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP432-201ENST00000362480 116 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.60-201ENST00000362831 98 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.65-201ENST00000362846 100 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.182-201ENST00000363880 111 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.797-201ENST00000515977 94 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 RNU6-111P-201ENST00000517179 105 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.25□□□□□ -2.37
HDHD3Q9BSH5 SNORA18-201ENST00000384416 132 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 MIR499A-201ENST00000384903 122 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP237-201ENST00000410414 113 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP144-201ENST00000410846 116 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 RNU4-71P-201ENST00000516258 113 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 AC133485.4-201ENST00000561835 220 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 MIR4503-201ENST00000582187 83 ntBASIC0.24□□□□□ -2.37
HDHD3Q9BSH5 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 SNORD115-2-201ENST00000362842 82 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.162-201ENST00000363683 102 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 Y_RNA.193-201ENST00000363979 102 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 SNORD115-20-201ENST00000365099 82 ntBASIC0.23□□□□□ -2.37
HDHD3Q9BSH5 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms