Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 SNORA26.6-201ENST00000391256 115 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 MIR942-201ENST00000401111 86 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 SNORD111-201ENST00000408139 94 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 MIR548I1-201ENST00000408810 149 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 RNU6-893P-201ENST00000458841 100 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 AC036111.3-201ENST00000526389 112 ntBASIC1.31□□□□□ -2.2
NUP88Q99567 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.31□□□□□ -2.2
NUP88Q99567 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 Y_RNA.251-201ENST00000364551 99 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU6-915P-201ENST00000364943 103 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 SNORD12C-201ENST00000386307 89 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 MIR1285-1-201ENST00000408593 84 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU6-240P-201ENST00000516098 97 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU7-200P-201ENST00000516105 62 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU6-255P-201ENST00000516957 105 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 RNU2-60P-201ENST00000517290 128 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 AP001328.1-201ENST00000528550 176 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 AC106800.4-201ENST00000614905 153 ntBASIC1.3□□□□□ -2.2
NUP88Q99567 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 Y_RNA.343-201ENST00000365354 112 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 Y_RNA.420-201ENST00000384043 110 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 MIR520E-201ENST00000384867 87 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 MIR588-201ENST00000384900 83 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 MIR7-2-201ENST00000384970 110 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 AC244023.1-201ENST00000426884 112 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 RPS29P1-201ENST00000465274 159 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 RNU6-1212P-201ENST00000517023 104 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 AC133485.4-201ENST00000561835 220 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 AC138907.4-201ENST00000570107 226 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 AC242498.1-201ENST00000604134 111 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 AC011603.4-201ENST00000611325 277 ntBASIC1.29□□□□□ -2.2
NUP88Q99567 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.29□□□□□ -2.2
NUP88Q99567 RNU6-309P-201ENST00000364573 106 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 RNU6-1237P-201ENST00000384777 107 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 AL603914.1-201ENST00000401964 204 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 AL022718.1-201ENST00000412004 84 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 RPL39P25-201ENST00000449384 154 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 Y_RNA.692-201ENST00000516627 105 ntBASIC1.28□□□□□ -2.2
NUP88Q99567 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
NUP88Q99567 RNU6-349P-201ENST00000362402 107 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 Y_RNA.430-201ENST00000384081 110 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 RNU7-197P-201ENST00000458836 62 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 AC021443.1-201ENST00000604478 211 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
NUP88Q99567 RNU6-508P-201ENST00000363231 103 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 MIR569-201ENST00000385228 96 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 MIR613-201ENST00000385248 95 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 RPS29P28-201ENST00000446439 141 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 RNA5SP272-201ENST00000516095 111 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 RNU6-346P-201ENST00000516288 111 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 RNU6-426P-201ENST00000516464 97 ntBASIC1.26□□□□□ -2.21
NUP88Q99567 AC010332.2-201ENST00000613083 1904 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 FABP5P4-201ENST00000437203 171 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 snoU13.2-201ENST00000459201 104 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 AC113410.1-201ENST00000505029 247 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 Y_RNA.757-201ENST00000578934 114 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 MIR6740-201ENST00000618268 113 ntBASIC1.25□□□□□ -2.21
NUP88Q99567 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NUP88Q99567 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
NUP88Q99567 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.24□□□□□ -2.21
NUP88Q99567 RNU6-1165P-201ENST00000410119 107 ntBASIC1.24□□□□□ -2.21
NUP88Q99567 RNA5SP144-201ENST00000410846 116 ntBASIC1.24□□□□□ -2.21
NUP88Q99567 SNORD83.1-201ENST00000411362 77 ntBASIC1.24□□□□□ -2.21
NUP88Q99567 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.24□□□□□ -2.21
NUP88Q99567 MIR4305-201ENST00000583252 102 ntBASIC1.24□□□□□ -2.21
NUP88Q99567 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 Y_RNA.540-201ENST00000384638 111 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 MIR100-201ENST00000385259 80 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 RNU7-164P-201ENST00000459221 62 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 Y_RNA.651-201ENST00000459380 103 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 MIR6841-201ENST00000637129 72 ntBASIC1.23□□□□□ -2.21
NUP88Q99567 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP88Q99567 Y_RNA.171-201ENST00000363760 102 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 RNU6-1062P-201ENST00000383908 107 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 Y_RNA.506-201ENST00000384494 102 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 POLR2J4-204ENST00000418424 324 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 snoU13.21-201ENST00000459368 105 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 MIR4771-2-201ENST00000577758 74 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 MIR4771-1-201ENST00000582617 74 ntBASIC1.22□□□□□ -2.21
NUP88Q99567 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NUP88Q99567 MIR1-1-201ENST00000362147 71 ntBASIC1.21□□□□□ -2.22
NUP88Q99567 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
NUP88Q99567 Y_RNA.366-201ENST00000365540 102 ntBASIC1.21□□□□□ -2.22
NUP88Q99567 SNORA18-201ENST00000384416 132 ntBASIC1.21□□□□□ -2.22
NUP88Q99567 AL136317.1-201ENST00000612653 226 ntBASIC1.21□□□□□ -2.22
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