Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PTCHD1Q96NR3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 SNORD115-35-201ENST00000365122 82 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 MIR488-201ENST00000365739 83 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNU7-2P-201ENST00000516096 62 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 AL512310.12-203ENST00000640543 90 ntBASIC1.92□□□□□ -2.1
PTCHD1Q96NR3 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-49P-201ENST00000384256 107 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU7-79P-201ENST00000516082 62 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD1Q96NR3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-294P-201ENST00000364999 102 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 MIR206-201ENST00000384872 86 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTCHD1Q96NR3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 SNORD67.1-201ENST00000516618 108 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 AL442128.1-201ENST00000615151 90 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 MALAT1.1-201ENST00000618249 95 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 MIR7843-201ENST00000622274 79 ntBASIC1.89□□□□□ -2.11
PTCHD1Q96NR3 RNU6-170P-201ENST00000362832 104 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORD45B-201ENST00000364617 72 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC004941.2-201ENST00000427009 228 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 RPL39P39-201ENST00000455840 151 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORA72.7-201ENST00000516349 94 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 AC012531.4-201ENST00000616509 177 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PTCHD1Q96NR3 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC244023.1-201ENST00000426884 112 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC242498.1-201ENST00000604134 111 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 AC096720.1-201ENST00000604441 183 ntBASIC1.87□□□□□ -2.11
PTCHD1Q96NR3 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 SNORD114-10-201ENST00000363409 72 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNY1P7-201ENST00000384743 110 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 AC096949.1-201ENST00000412047 152 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 RNU7-137P-201ENST00000516788 62 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
PTCHD1Q96NR3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNY1P13-201ENST00000365030 105 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU6-396P-201ENST00000365369 105 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 UBL5P1-201ENST00000507979 193 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 RNU7-61P-201ENST00000515897 61 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 AC141846.1-201ENST00000568348 142 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 MIR548Z-201ENST00000584743 97 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 275.1 ms